RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CXorf49A8MYA2 514 aaPredicted RBP14.39□□□□□ -0.11
USB1-202ENST00000423271 LCMT2O60294 686 aaKnown RBP14.39□□□□□ -0.11
USB1-202ENST00000423271 ABCB7O75027 752 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 SEMA7AO75326 666 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 JRKO75564 520 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 KLHL18O94889 574 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 AGFG2O95081 481 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 C1QAP02745 245 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 HEXBP07686 556 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 GSTA2P09210 222 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 IL1RNP18510 177 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 HRH2P25021 359 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 AVPR1BP47901 424 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 GLRBP48167 497 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 IL2P60568 153 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 NDUFA9Q16795 377 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
USB1-202ENST00000423271 FAM45BPQ6NSW5 357 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 LCTLQ6UWM7 567 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 TMEM207Q6UWW9 146 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 LINC00696Q6ZRV3 163 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 NDUFAF7Q7L592 441 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 ZCCHC10Q8TBK6 192 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 FAM45AQ8TCE6 357 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 PYCR2Q96C36 320 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 CNDP1Q96KN2 507 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 PSMG3-AS1Q96PY0 264 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 ARL15Q9NXU5 204 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 NINJ2Q9NZG7 142 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 CORO1CQ9ULV4 474 aaPredicted RBP14.39□□□□□ -0.11
USB1-202ENST00000423271 VWA7Q9Y334 891 aa14.39□□□□□ -0.11
USB1-202ENST00000423271 KCNE1BA0A087WTH5 132 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 IGHV1-45A0A0A0MS14 117 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 A0A1W2PQ72 361 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 BMP10O95393 424 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 NSA2O95478 260 aaKnown RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 GUCA1CO95843 209 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 HIST1H2AGP0C0S8 130 aaPredicted RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 PRR35P0CG20 571 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 NPPBP16860 134 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 HIST1H2ADP20671 130 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 CCND1P24385 295 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 CXCR2P25025 360 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 VARSP26640 1264 aaKnown RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 MEF2AQ02078 507 aaPredicted RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 ZNF460Q14592 562 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 PCOLCEQ15113 449 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 CAPN13Q6MZZ7 669 aaPredicted RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 CEP128Q6ZU80 1094 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 STRA8Q7Z7C7 330 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 KBTBD2Q8IY47 623 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 KCT2Q8NC54 265 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 OR56A3Q8NH54 315 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 BRIX1Q8TDN6 353 aaKnown RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 FBF1Q8TES7 1133 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 PSMF1Q92530 271 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 TM4SF19Q96DZ7 209 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 HIST1H2AHQ96KK5 128 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 OR4K3Q96R72 315 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 HIST1H2AJQ99878 128 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 H2AFJQ9BTM1 129 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 EPS8L2Q9H6S3 715 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 HCN3Q9P1Z3 774 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 MKL2Q9ULH7 1088 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 COPG1Q9Y678 874 aaKnown RBP14.38□□□□□ -0.11
USB1-202ENST00000423271 SVILO95425 2214 aa14.38□□□□□ -0.11
USB1-202ENST00000423271 LOC102723996A0A087X1L8 192 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 FAM159BA6NKW6 160 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 H0YIG0 161 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SGK494L7N484 410 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SLU7O95391 586 aaKnown RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 ZNF37AP17032 561 aaPredicted RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 SAT1P21673 171 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SOX11P35716 441 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 AP1S2P56377 157 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 MFAP5Q13361 173 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 ZNF169Q14929 603 aaPredicted RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SBSNQ6UWP8 590 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 ISLR2Q6UXK2 745 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 CYS1Q717R9 158 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 ASPGQ86U10 573 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SLC26A11Q86WA9 606 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 ZC3HC1Q86WB0 502 aaKnown RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 PDSS2Q86YH6 399 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 RELL1Q8IUW5 271 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 GSPT2Q8IYD1 628 aaKnown RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 SIRT6Q8N6T7 355 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 CAMKVQ8NCB2 501 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 CDKL2Q92772 493 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 FBXL8Q96CD0 374 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 THAP11Q96EK4 314 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 BARD1Q99728 777 aaKnown RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 VN1R1Q9GZP7 353 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 TSPYL1Q9H0U9 437 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 SPNS1Q9H2V7 528 aa14.37□□□□□ -0.11
USB1-202ENST00000423271 CDC42EP4Q9H3Q1 356 aaKnown RBP14.37□□□□□ -0.11
USB1-202ENST00000423271 NSMCE4AQ9NXX6 385 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms