RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 GPR83Q9NYM4 423 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 CCL27Q9Y4X3 112 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 SPATA31D1Q6ZQQ2 1576 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 IGLV3-10A0A075B6K4 115 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 IGHV3-20A0A0C4DH32 117 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 A8MXE2 369 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 SURF4O15260 269 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 EIF5BO60841 1220 aaKnown RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 POP4O95707 220 aaKnown RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 CD59P13987 128 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 AADACP22760 399 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 DHODHQ02127 395 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 RBPJQ06330 500 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 COG2Q14746 738 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 FAM189A2Q15884 450 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 FAM133BQ5BKY9 247 aaKnown RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 SEL1L3Q68CR1 1132 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 RBPMS2Q6ZRY4 209 aaKnown RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 CDHR3Q6ZTQ4 885 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 ADCK2Q7Z695 626 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 ZPLD1Q8TCW7 415 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 METTL21AQ8WXB1 218 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 PROX1Q92786 737 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 SIPA1Q96FS4 1042 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 LINC00615Q96LM1 132 aaPredicted RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF558Q96NG5 402 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 KLHL5Q96PQ7 755 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 ATF6BQ99941 703 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF577Q9BSK1 485 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 DNAI2Q9GZS0 605 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 SDCBP2Q9H190 292 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 TXNDC16Q9P2K2 825 aa3.14□□□□□ -1.91
LINC00397-201ENST00000422074 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.14□□□□□ -1.91
LINC00397-201ENST00000422074 IGHV3-38A0A0C4DH36 116 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 A0A1W2PNU3 283 aaPredicted RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 CCL24O00175 119 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 SLC1A7O00341 560 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 RPS6KA5O75582 802 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ACSL3O95573 720 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 FDPSP14324 419 aaKnown RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ACHEP22303 614 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 RAD23AP54725 363 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF841Q6ZN19 808 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 SLC24A5Q71RS6 500 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 CPEB2Q7Z5Q1 589 aaKnown RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 CCDC60Q8IWA6 550 aaPredicted RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 CAMKVQ8NCB2 501 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 KCNE4Q8WWG9 221 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ROBO4Q8WZ75 1007 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 OTUB1Q96FW1 271 aaPredicted RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 SPATA17Q96L03 361 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 GBP5Q96PP8 586 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 RAB3IPQ96QF0 476 aaPredicted RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 PSMB7Q99436 277 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 PI4K2AQ9BTU6 479 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 RAVER2Q9HCJ3 691 aaKnown RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ZCCHC17Q9NP64 241 aaKnown RBP3.13□□□□□ -1.91
LINC00397-201ENST00000422074 TBC1D13Q9NVG8 400 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 GTSE1Q9NYZ3 720 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 TBC1D7Q9P0N9 293 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 GIMAP2Q9UG22 337 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
LINC00397-201ENST00000422074 AP5Z1O43299 807 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ECE2O60344 883 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 CELF2O95319 508 aaKnown RBP3.12□□□□□ -1.91
LINC00397-201ENST00000422074 GSRP00390 522 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 OR52Z1P0C646 297 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ALDH1B1P30837 517 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 HSPA4P34932 840 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 DLK1P80370 383 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 FCHO2Q0JRZ9 810 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF146Q15072 292 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 KRBOX4Q5JUW0 171 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 CTR9Q6PD62 1173 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 PRSS55Q6UWB4 352 aaPredicted RBP3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ANKRD33Q7Z3H0 272 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 SLFN11Q7Z7L1 901 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 VSIG1Q86XK7 387 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 FGFRL1Q8N441 504 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 PI4KAP1Q8N8J0 262 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 XXYLT1Q8NBI6 393 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 KIF18AQ8NI77 898 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF414Q96IQ9 312 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ZMAT2Q96NC0 199 aaKnown RBP3.12□□□□□ -1.91
LINC00397-201ENST00000422074 BTBD9Q96Q07 612 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 NAA11Q9BSU3 229 aaPredicted RBP3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ANKRD2Q9GZV1 360 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 IL36AQ9UHA7 158 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 FBXL4Q9UKA2 621 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 FER1L5A0AVI2 2057 aa3.12□□□□□ -1.91
LINC00397-201ENST00000422074 ARHGEF37A1IGU5 675 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 KLLNB2CW77 178 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 GPRIN2O60269 458 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 CYTIPO60759 359 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SLCO2B1O94956 709 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 PENKP01210 267 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms