RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 EPHX1P07099 455 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 PRPS2P11908 318 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 EMP3P54852 163 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 CDK5R2Q13319 367 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 AQP6Q13520 282 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 DMC1Q14565 340 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 DHCR24Q15392 516 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 CPZQ66K79 652 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 LRRC70Q7Z2Q7 622 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 GPR149Q86SP6 731 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
MCF2L-213ENST00000421756 PLA2G15Q8NCC3 412 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 BTN2A2Q8WVV5 523 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 UCN3Q969E3 161 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 EXOSC8Q96B26 276 aaKnown RBP12.86□□□□□ -0.35
MCF2L-213ENST00000421756 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 SNX11Q9Y5W9 270 aa12.86□□□□□ -0.35
MCF2L-213ENST00000421756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 SUV39H1O43463 412 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PRKRAO75569 313 aaKnown RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PTPN2P17706 415 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PRPS1L1P21108 318 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 MAPK1P28482 360 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 CREMQ03060 361 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 EMX1Q04741 257 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ABHD18Q0P651 414 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ERAP2Q6P179 960 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 GORASP2Q9H8Y8 452 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 TMEFF2Q9UIK5 374 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 H7BY64 318 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 SGTAO43765 313 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ABCB7O75027 752 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 OLFM2O95897 454 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 VPS37AQ8NEZ2 397 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 BADQ92934 168 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PRAP1Q96NZ9 151 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 MUC13Q9H3R2 512 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 RAD21L1Q9H4I0 556 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 DYRK4Q9NR20 520 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 TAC3Q9UHF0 121 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 TRPM6Q9BX84 2022 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 DYTNA2CJ06 578 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 SMIM30A4D0T7 59 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 NUAK1O60285 661 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 BCAS1O75363 584 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 APOL3O95236 402 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 NADKO95544 446 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 COMMD6Q7Z4G1 85 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PAPD5Q8NDF8 572 aaKnown RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 TANKQ92844 425 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 VOPP1Q96AW1 172 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ZNF689Q96CS4 500 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-213ENST00000421756 F2RL3Q96RI0 385 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 FEVQ99581 238 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 ANKRA2Q9H9E1 313 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 DYRK1BQ9Y463 629 aa12.85□□□□□ -0.35
MCF2L-213ENST00000421756 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SEC16AO15027 2179 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 DBTP11182 482 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SOX9P48436 509 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CLK3P49761 638 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SEC13P55735 322 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 RPP38P78345 283 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ADCK1Q86TW2 530 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ARSGQ96EG1 525 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ALOXE3Q9BYJ1 711 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SAMD4AQ9UPU9 718 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 NDUFS2O75306 463 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ISL1P61371 349 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CD300CQ08708 224 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 LAIR2Q6ISS4 152 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 FAM124AQ86V42 546 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CBARPQ8N350 705 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 ECHDC3Q96DC8 303 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SMAD5Q99717 465 aaKnown RBP12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 TMEM247A6NEH6 219 aa12.84□□□□□ -0.35
MCF2L-213ENST00000421756 CCNDBP1O95273 360 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms