RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RIOK2Q9BVS4 552 aaKnown RBP13.96□□□□□ -0.17
HDAC9-208ENST00000417496 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.17
HDAC9-208ENST00000417496 FAM83DQ9H4H8 585 aa13.96□□□□□ -0.17
HDAC9-208ENST00000417496 GPATCH2Q9NW75 528 aa13.96□□□□□ -0.17
HDAC9-208ENST00000417496 OR2A25A4D2G3 310 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 TTC34A8MYJ7 566 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 EFCAB9A8MZ26 197 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 NEDD8-MDP1E9PL57 170 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PITPNM1O00562 1244 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 SCAMP2O15127 329 aaKnown RBP13.96□□□□□ -0.18
HDAC9-208ENST00000417496 C9P02748 559 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 URODP06132 367 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 SLC19A1P41440 591 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 DGKEP52429 567 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 CRISP3P54108 245 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 MC1RQ01726 317 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PLEKHS1Q5SXH7 462 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 OTOP2Q7RTS6 562 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PRSS48Q7RTY5 328 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 SLC5A8Q8N695 610 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 HUS1BQ8NHY5 278 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PSMA8Q8TAA3 256 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 C11orf24Q96F05 449 aaPredicted RBP13.96□□□□□ -0.18
HDAC9-208ENST00000417496 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 COPS4Q9BT78 406 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 EPS8L2Q9H6S3 715 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 FAM120CQ9NX05 1096 aaKnown RBP13.96□□□□□ -0.18
HDAC9-208ENST00000417496 NDUFAF4Q9P032 175 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 KLHL42Q9P2K6 505 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 ACSL6Q9UKU0 697 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 EXO1Q9UQ84 846 aaKnown RBP13.96□□□□□ -0.18
HDAC9-208ENST00000417496 HS3ST2Q9Y278 367 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PPIL1Q9Y3C6 166 aa13.96□□□□□ -0.18
HDAC9-208ENST00000417496 PLXNB3Q9ULL4 1909 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 C1orf226A1L170 272 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 J3KTA2 159 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 MPC1LP0DKB6 136 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 EIF2B2P49770 351 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 PTPN5P54829 565 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 AP1S2P56377 157 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 CYP4F2P78329 520 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF385BQ569K4 471 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 LIPJQ5W064 366 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 ERICH5Q6P6B1 374 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 PLD3Q8IV08 490 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 P3H2Q8IVL5 708 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 PGBD3Q8N328 593 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 LMLNQ96KR4 655 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 FCRL1Q96LA6 429 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 STOX2Q9P2F5 926 aaPredicted RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 ERVW-1Q9UQF0 538 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 RUVBL1Q9Y265 456 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 HSPE1-MOB4S4R3N1 261 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 MGAT4DA6NG13 374 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 PRAMEF25A6NGN4 478 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 HLA-EP13747 358 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 IDSP22304 550 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 WEE1P30291 646 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 CLK1P49759 484 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 RPS13P62277 151 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 HBA1P69905 142 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 SLC13A2Q13183 592 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 CARTPTQ16568 116 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 TTC23LQ6PF05 361 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 MSANTD1Q6ZTZ1 278 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 SLC39A11Q8N1S5 342 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 OR4A15Q8NGL6 344 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 OR2A12Q8NGT7 310 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 OR5AK3PQ8NH89 298 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 NEIL2Q969S2 332 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 NIPSNAP1Q9BPW8 284 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 RAD18Q9NS91 495 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 GPR83Q9NYM4 423 aa13.95□□□□□ -0.18
HDAC9-208ENST00000417496 PAIP2BQ9ULR5 123 aaKnown RBP13.95□□□□□ -0.18
HDAC9-208ENST00000417496 NPIPB8E9PQR5 432 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 M0R082 166 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 ALDH1A1P00352 501 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MAGP20916 626 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 TGM1P22735 817 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MEF2AQ02078 507 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 CSTF3Q12996 717 aaKnown RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 VEZF1Q14119 521 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MPP7Q5T2T1 576 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 GDPD4Q6W3E5 623 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SVOPQ8N4V2 548 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 CLP1Q92989 425 aaKnown RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 CIDECQ96AQ7 238 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SIGLEC11Q96RL6 698 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 DOHHQ9BU89 302 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 DCSTAMPQ9H295 470 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms