RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 LETMD1Q6P1Q0 360 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 TLDC1Q6P9B6 456 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 IGF2-ASQ6U949 168 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 TTLL10Q6ZVT0 673 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 SYVN1Q86TM6 617 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 BPHLQ86WA6 291 aaPredicted RBP16.9■□□□□ 0.3
SBDS-202ENST00000414306 KCT2Q8NC54 265 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 ZNF285Q96NJ3 590 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 TMEM121BQ9BXQ6 578 aaPredicted RBP16.9■□□□□ 0.3
SBDS-202ENST00000414306 NKIRAS1Q9NYS0 192 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 ZFP69BQ9UJL9 534 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 MRPS2Q9Y399 296 aaKnown RBP16.9■□□□□ 0.3
SBDS-202ENST00000414306 KCNE1BA0A087WTH5 132 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 HMGB1P1B2RPK0 211 aaPredicted RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 TLX3O43711 291 aaPredicted RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 CPNE3O75131 537 aaKnown RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 OR4F21O95013 312 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 OTCP00480 354 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 NEFHP12036 1026 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 CASP2P42575 452 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 LCP2Q13094 533 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 GPS2Q13227 327 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 LAPTM5Q13571 262 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 TGIF1Q15583 401 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 PRTGQ2VWP7 1150 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 MED27Q6P2C8 311 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 UNQ6494/PRO21346Q6UXR6 183 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 FRMD7Q6ZUT3 714 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 GPRIN3Q6ZVF9 776 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 TIPARPQ7Z3E1 657 aaKnown RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 NUDCD3Q8IVD9 361 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 PPP1R14CQ8TAE6 165 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 MTFMTQ96DP5 389 aaKnown RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 THAP11Q96EK4 314 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 C10orf90Q96M02 699 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 ZNF578Q96N58 590 aaPredicted RBP16.89■□□□□ 0.29
SBDS-202ENST00000414306 DRC3Q9H069 523 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 CUTCQ9NTM9 273 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 TXLNGQ9NUQ3 528 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 ZNF225Q9UK10 706 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 PCDHB3Q9Y5E6 796 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 AP1M2Q9Y6Q5 423 aa16.89■□□□□ 0.29
SBDS-202ENST00000414306 ANKDD1BA6NHY2 528 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 STMND1H3BQB6 276 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 UBFD1O14562 309 aaKnown RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 SLC35G6P0C7Q6 338 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 SLC9A5Q14940 896 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 SGO1Q5FBB7 561 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 TCHHL1Q5QJ38 904 aaPredicted RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 LIPJQ5W064 366 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 VN1R5Q7Z5H4 357 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 CDYL2Q8N8U2 506 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 L3MBTL4Q8NA19 623 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 CAMKVQ8NCB2 501 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 OR7G3Q8NG95 312 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 KCNA7Q96RP8 456 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 NTMT1Q9BV86 223 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 SARGQ9BW04 601 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 NLNQ9BYT8 704 aa16.88■□□□□ 0.29
SBDS-202ENST00000414306 AKIRIN1Q9H9L7 192 aaPredicted RBP16.88■□□□□ 0.29
SBDS-202ENST00000414306 FITM1A5D6W6 292 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 MLYCDO95822 493 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 DLGAP3O95886 979 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 B3GALT4O96024 378 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 DHRS4L1P0CG22 281 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 BGNP21810 368 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 AHRP35869 848 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 ATP1A2P50993 1020 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 NEK2P51955 445 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 ASPHQ12797 758 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 E2F2Q14209 437 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 CHI3L2Q15782 390 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 TOR1AIP1Q5JTV8 583 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 CES4AQ5XG92 561 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 FAM199XQ6PEV8 388 aaPredicted RBP16.87■□□□□ 0.29
SBDS-202ENST00000414306 C6orf15Q6UXA7 325 aaPredicted RBP16.87■□□□□ 0.29
SBDS-202ENST00000414306 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 CREB3L4Q8TEY5 395 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 AGAP11Q8TF27 550 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.87■□□□□ 0.29
SBDS-202ENST00000414306 SREK1Q8WXA9 508 aaKnown RBP16.87■□□□□ 0.29
SBDS-202ENST00000414306 TM4SF19Q96DZ7 209 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 ZNF382Q96SR6 550 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 KLHL31Q9H511 634 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 TMEM184BQ9Y519 407 aaPredicted RBP16.87■□□□□ 0.29
SBDS-202ENST00000414306 MAU2Q9Y6X3 613 aa16.87■□□□□ 0.29
SBDS-202ENST00000414306 A0A0G2JN53 185 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 RAD1O60671 282 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 UGDHO60701 494 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 CAPN1P07384 714 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 CHRNGP07510 517 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 PCBP4P57723 403 aaKnown RBP16.86■□□□□ 0.29
SBDS-202ENST00000414306 RGS1Q08116 209 aa16.86■□□□□ 0.29
SBDS-202ENST00000414306 PCDH1Q08174 1060 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms