RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ATP1A1-AS1Q5TC04 95 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 TMIGD1Q6UXZ0 262 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 VN1R4Q7Z5H5 301 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 LCA5Q86VQ0 697 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 APLFQ8IW19 511 aaPredicted RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 CENPLQ8N0S6 344 aaPredicted RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
CHD1-202ENST00000414220 C10orf90Q96M02 699 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 TXLNGYQ9BZA5 131 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 SEMA3GQ9NS98 782 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 C14orf105Q9NVL8 296 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 TRPC4Q9UBN4 977 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 MAP4K5Q9Y4K4 846 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 KCNMB2Q9Y691 235 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 SLC22A7Q9Y694 548 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 CELSR3Q9NYQ7 3312 aa13.99□□□□□ -0.17
CHD1-202ENST00000414220 A0A0A6YYC8 382 aaPredicted RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 ARGFXA6NJG6 315 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 I3L1I5 382 aaPredicted RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 K7EPI3 171 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 MAP2K7O14733 419 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 PCDH17O14917 1159 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 P2RX6O15547 441 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 FAM87AP0C7U9 286 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 MAGEA12P43365 314 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 CSRP3P50461 194 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 ALDH18A1P54886 795 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 STXBP1P61764 594 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 NFKB2Q00653 900 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 IL10RAQ13651 578 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 LY6DQ14210 128 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 RBBP7Q16576 425 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 C18orf21Q32NC0 220 aaPredicted RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 UBAP2Q5T6F2 1119 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 TMEM214Q6NUQ4 689 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 METTL2BQ6P1Q9 378 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 TIFABQ6ZNK6 161 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 SLCO4C1Q6ZQN7 724 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 STT3BQ8TCJ2 826 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 TMEM79Q9BSE2 394 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 NT5DC2Q9H857 520 aa13.98□□□□□ -0.17
CHD1-202ENST00000414220 CPSF2Q9P2I0 782 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 RALYQ9UKM9 306 aaKnown RBP13.98□□□□□ -0.17
CHD1-202ENST00000414220 SPTBP11277 2137 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 A0A088AWK7 358 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 VSTM2BA6NLU5 285 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 TUBBP07437 444 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 SERPINA6P08185 405 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 FURINP09958 794 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ZGLP1P0C6A0 271 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 TAC1P20366 129 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 IL10P22301 178 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 MMP11P24347 488 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 VARSP26640 1264 aaKnown RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 KCNC1P48547 511 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 TGM3Q08188 693 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 C19orf57Q0VDD7 668 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHD1-202ENST00000414220 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 TBCCQ15814 346 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 PFKFB4Q16877 469 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 IRAK1BP1Q5VVH5 260 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 COX15Q7KZN9 410 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 CLEC1AQ8NC01 280 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 C9orf43Q8TAL5 461 aaPredicted RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 ZCCHC10Q8TBK6 192 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 NT5CQ8TCD5 201 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ACMSDQ8TDX5 336 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ADAMTS17Q8TE56 1095 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 UBTD2Q8WUN7 234 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 CCT6BQ92526 530 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ESAMQ96AP7 390 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 FAR2Q96K12 515 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 MRPL57Q9BQC6 102 aaKnown RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 CRB3Q9BUF7 120 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 ING2Q9H160 280 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 SLC25A18Q9H1K4 315 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 ANKZF1Q9H8Y5 726 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 CLK4Q9HAZ1 481 aaKnown RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 SLC22A11Q9NSA0 550 aa13.97□□□□□ -0.17
CHD1-202ENST00000414220 SNRNP200O75643 2136 aaKnown RBP13.97□□□□□ -0.17
CHD1-202ENST00000414220 IGLV3-12A0A075B6K2 115 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 FOXS1O43638 330 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 STATHP02808 62 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 HEXBP07686 556 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 MYBL2P10244 700 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 ALOX12P18054 663 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 SERPINB1P30740 379 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 GMPRP36959 345 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 EMP2P54851 167 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 PHEXP78562 749 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 CHIT1Q13231 466 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 FBXO48Q5FWF7 155 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 MRGPREQ86SM8 312 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms