RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SPRY4Q9C004 299 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 B3GNT4Q9C0J1 378 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 NT5DC2Q9H857 520 aa29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 DHCR7Q9UBM7 475 aaKnown RBP29.17■■■□□ 2.26
CSNK1E-206ENST00000413574 FITM1A5D6W6 292 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 UGDHO60701 494 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 OR4F21O95013 312 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 HNF4AP41235 474 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 SLC18A1P54219 525 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 GRM7Q14831 915 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 TBC1D25Q3MII6 688 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 HHATQ5VTY9 493 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 MED27Q6P2C8 311 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 RNF175Q8N4F7 328 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 KCT2Q8NC54 265 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 OR7G3Q8NG95 312 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 SHCBP1LQ9BZQ2 653 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 PCDHB3Q9Y5E6 796 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 ZFHX4Q86UP3 3567 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 SCN3AQ9NY46 2000 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 MLYCDO95822 493 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 PCNAP12004 261 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 GCGRP47871 477 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 CES4AQ5XG92 561 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 TIPARPQ7Z3E1 657 aaKnown RBP29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 LAS2Q8IYD9 372 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 GALNT6Q8NCL4 622 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 CREB3L4Q8TEY5 395 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 CLIP3Q96DZ5 547 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 ZNF578Q96N58 590 aaPredicted RBP29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 ZNF382Q96SR6 550 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 NDC1Q9BTX1 674 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 SLC7A5P2Q9GIP4 190 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 PITHD1Q9GZP4 211 aaPredicted RBP29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 ENAMQ9NRM1 1142 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 NKIRAS1Q9NYS0 192 aa29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 MRPS2Q9Y399 296 aaKnown RBP29.16■■■□□ 2.26
CSNK1E-206ENST00000413574 HYKKA2RU49 373 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 C1QTNF9BB2RNN3 333 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 FFAR3O14843 346 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 GPR42O15529 346 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 C1QTNF9P0C862 333 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 ATXN8OSP0DMR3 200 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 ASPHQ12797 758 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 ZRSR2Q15696 482 aaKnown RBP29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 GPRIN3Q6ZVF9 776 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 TTC29Q8NA56 475 aaPredicted RBP29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 MID1IP1Q9NPA3 183 aa29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 TMEM184BQ9Y519 407 aaPredicted RBP29.15■■■□□ 2.26
CSNK1E-206ENST00000413574 BIRC5O15392 142 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 CPNE3O75131 537 aaKnown RBP29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 C1orf189Q5VU69 101 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 TTLL10Q6ZVT0 673 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 ARHGEF39Q8N4T4 335 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 CAMKVQ8NCB2 501 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 AGAP11Q8TF27 550 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 CCT6BQ92526 530 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 C10orf90Q96M02 699 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 RHBGQ9H310 441 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 AKIRIN1Q9H9L7 192 aaPredicted RBP29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 TNFRSF12AQ9NP84 129 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 CUTCQ9NTM9 273 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 DMXL2Q8TDJ6 3036 aa29.14■■■□□ 2.26
CSNK1E-206ENST00000413574 SEC16AO15027 2179 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 ANKDD1BA6NHY2 528 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 ATP8B1O43520 1251 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 DLGAP3O95886 979 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 TBX6O95947 436 aaPredicted RBP29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 SLC35G6P0C7Q6 338 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 ALAS2P22557 587 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 HYAL2Q12891 473 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 GPS2Q13227 327 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 DDX39BQ13838 428 aaKnown RBP29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 CHI3L2Q15782 390 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 ATG14Q6ZNE5 492 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 CDYL2Q8N8U2 506 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 TRPV3Q8NET8 790 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 OR6Y1Q8NGX8 325 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 MTFMTQ96DP5 389 aaKnown RBP29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 KCNA7Q96RP8 456 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 DRC3Q9H069 523 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 AHCTF1Q8WYP5 2266 aa29.13■■■□□ 2.25
CSNK1E-206ENST00000413574 H0YIV9 168 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 CHRNGP07510 517 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 BGNP21810 368 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 ARRB2P32121 409 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NEK2P51955 445 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 TCHHL1Q5QJ38 904 aaPredicted RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 METTL27Q8N6F8 245 aaPredicted RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 ZCCHC10Q8TBK6 192 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 SREK1Q8WXA9 508 aaKnown RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 UBE2E3Q969T4 207 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 CNDP1Q96KN2 507 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NLNQ9BYT8 704 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 AICDAQ9GZX7 198 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 KLHL31Q9H511 634 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 CCDC86Q9H6F5 360 aaKnown RBP29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 PRM3Q9NNZ6 103 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 NDOR1Q9UHB4 597 aa29.12■■■□□ 2.25
CSNK1E-206ENST00000413574 TRPS1Q9UHF7 1281 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms