RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ARHGEF17Q96PE2 2063 aaPredicted RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 PCM1Q15154 2024 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CACNA1EQ15878 2313 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 FAM234BA2RU67 622 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ASPDHA6ND91 283 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CFAP73A6NFT4 308 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 RHPN2P1A8MT19 583 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 B2RBV5 119 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SAP18O00422 153 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 FBP2O00757 339 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PLPP1O14494 284 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ARHGAP33O14559 1287 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 GYG2O15488 501 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NDUFS4O43181 175 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NUDT21O43809 227 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 PCDH7O60245 1069 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 LCMT2O60294 686 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 DFNA5O60443 496 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CLEC3AO75596 197 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 MYO1DO94832 1006 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CER1O95813 267 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TGFB1P01137 390 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PROS1P07225 676 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SNRPB2P08579 225 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 ALPPL2P10696 532 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PCSK2P16519 638 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TYRP1P17643 537 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ITGAXP20702 1163 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TACR1P25103 407 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PTX3P26022 381 aaPredicted RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 IL12AP29459 219 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 HNRNPH1P31943 449 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 AHRP35869 848 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CPOXP36551 454 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 MPLP40238 635 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NUDT2P50583 147 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 POLR2JP52435 117 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 CORO7P57737 925 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 KCNK10P57789 538 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 RPS15AP62244 130 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 KCNJ2P63252 427 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 RAE1P78406 368 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 MXRA7P84157 204 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CYP4F3Q08477 520 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NR1D2Q14995 579 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ADPRMQ3LIE5 342 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 DNAL1Q4LDG9 190 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TIGD2Q4W5G0 525 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TRIM61Q5EBN2 209 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 COQ5Q5HYK3 327 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 KHDRBS2Q5VWX1 349 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 FCRL6Q6DN72 434 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ARMC6Q6NXE6 501 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NOXRED1Q6NXP6 359 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 GALNT18Q6P9A2 607 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 KLHL35Q6PF15 583 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SLC23A3Q6PIS1 610 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 RNF44Q7L0R7 432 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ZNF438Q7Z4V0 828 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 GATAD2AQ86YP4 633 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 FAM9CQ8IZT9 166 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 METTL4Q8N3J2 472 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 MFSD9Q8NBP5 474 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 OR4C6Q8NH72 309 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CLHC1Q8NHS4 586 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 BAHD1Q8TBE0 780 aaPredicted RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 SAP25Q8TEE9 199 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TSPEARQ8WU66 669 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CHTF18Q8WVB6 975 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SPDL1Q96EA4 605 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PPM1MQ96MI6 270 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TSSK3Q96PN8 268 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 NPAS2Q99743 824 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 BTBD10Q9BSF8 475 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 DUSP23Q9BVJ7 150 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 ZNF717Q9BY31 904 aaPredicted RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 C1orf21Q9H246 121 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 OR51B5Q9H339 312 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 CLMPQ9H6B4 373 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 GAREM1Q9H706 876 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SLC52A3Q9NQ40 469 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TAS2R1Q9NYW7 299 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 LRIT1Q9P2V4 623 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PILRAQ9UKJ1 303 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 SLC6A14Q9UN76 642 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 PCDHGA4Q9Y5G9 962 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 AP1M2Q9Y6Q5 423 aa6.36□□□□□ -1.39
VPS41-204ENST00000413141 TDRD6O60522 2096 aaKnown RBP6.36□□□□□ -1.39
VPS41-204ENST00000413141 SNRNP200O75643 2136 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 DMDP11532 3685 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 LY6G6EA0A0G2JKS1 128 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 A0A1W2PP18 115 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 DYTNA2CJ06 578 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 CCDC154A6NI56 674 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 PRR33A8MZF0 331 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 C4orf51C9J302 202 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 TNFRSF10AO00220 468 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 TRIM38O00635 465 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 MRASO14807 208 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms