RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 SULT1C2O00338 296 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 CAPN5O15484 640 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 BANF1O75531 89 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TGM6O95932 706 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 DRD2P14416 443 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GNSP15586 552 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ENGP17813 658 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 HSD11B1P28845 292 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TAS2R31P59538 309 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PSMA6P60900 246 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ARF5P84085 180 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 VLDLRP98155 873 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM35AQ53FP2 167 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GARNL3Q5VVW2 1013 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM214Q6NUQ4 689 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 DENND6BQ8NEG7 585 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ZMIZ2Q8NF64 920 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SUN3Q8TAQ9 357 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ADAMTS16Q8TE57 1224 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 LRRC46Q96FV0 321 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PHOX2BQ99453 314 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ACAT2Q9BWD1 397 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TNKS2Q9H2K2 1166 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 METTL8Q9H825 291 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SLC28A3Q9HAS3 691 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SIX2Q9NPC8 291 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ACOT13Q9NPJ3 140 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 C11orf16Q9NQ32 467 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 COMMD3Q9UBI1 195 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 FKBPLQ9UIM3 349 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 MMP2P08253 660 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 WDR4P57081 412 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 RING1Q06587 406 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 INCA1Q0VD86 236 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ELOAQ14241 798 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GNMTQ14749 295 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 UBAP2Q5T6F2 1119 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 HSDL2Q6YN16 418 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TSPAN33Q86UF1 283 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 CEP97Q8IW35 865 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 NAT16Q8N8M0 369 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 C2CD4AQ8NCU7 369 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 OR2L8Q8NGY9 312 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GPR151Q8TDV0 419 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GTPBP3Q969Y2 492 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 CDKN2AIPNLQ96HQ2 116 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ADAD1Q96M93 576 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SAMD11Q96NU1 681 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 C11orf84Q9BUA3 381 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 HOXD1Q9GZZ0 328 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM168Q9H0V1 697 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 NLE1Q9NVX2 485 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM248Q9NWD8 314 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ZFP37Q9Y6Q3 630 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TISP43B9A030 160 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 NPIPA5E9PKD4 350 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ITM2AO43736 263 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TBX10O75333 385 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GP1BBP13224 206 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SHMT2P34897 504 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ASPAP45381 313 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 YAP1P46937 504 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ARSFP54793 590 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TLE3Q04726 772 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF763Q0D2J5 394 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 COL28A1Q2UY09 1125 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GDPD4Q6W3E5 623 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 RAB11FIP2Q7L804 512 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 C14orf80Q86SX3 495 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 FTMTQ8N4E7 242 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 DNAJC22Q8N4W6 341 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PROKR2Q8NFJ6 384 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 OR52E4Q8NGH9 312 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TRIB2Q92519 343 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 DPF3Q92784 378 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 SLA2Q9H6Q3 261 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PTGES2Q9H7Z7 377 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 AKTIPQ9H8T0 292 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 DUS2Q9NX74 493 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 KLHL42Q9P2K6 505 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 NPIPA1Q9UND3 350 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PXDNQ92626 1479 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM131LA2VDJ0 1609 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 BLACEA4D250 179 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 BUD23O43709 281 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 KDELR3O43731 214 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ATP6V1G1O75348 118 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 IFNA5P01569 189 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ATP1B2P14415 290 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GJA1P17302 382 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PITPNBP48739 271 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 STC1P52823 247 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PRKCDQ05655 676 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GRSF1Q12849 480 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 GRK1Q15835 563 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 CLVS2Q5SYC1 327 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 CLEC6AQ6EIG7 209 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ALG1LQ6GMV1 187 aa5.92□□□□□ -1.46
SCN1A-203ENST00000409050 PDE12Q6L8Q7 609 aaKnown RBP5.92□□□□□ -1.46
SCN1A-203ENST00000409050 ARHGAP11AQ6P4F7 1023 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms