RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 GALNT11Q8NCW6 608 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 OR9A4Q8NGU2 314 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 NEIL2Q969S2 332 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 AGAP4Q96P64 663 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 PELI2Q9HAT8 420 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 ANKHQ9HCJ1 492 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 RIC8BQ9NVN3 520 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 DYRK1BQ9Y463 629 aa14.09□□□□□ -0.15
SMIM11A-203ENST00000399299 SCN3AQ9NY46 2000 aa14.08□□□□□ -0.15
SMIM11A-203ENST00000399299 USP9YO00507 2555 aaPredicted RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 IGHV1-45A0A0A0MS14 117 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 NSG1A0A0A6YYJ2 146 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 FFAR3O14843 346 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 GPR42O15529 346 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 OR1F1O43749 312 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 IL1RNP18510 177 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 AHRP35869 848 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 MAGEA4P43358 317 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 NAB1Q13506 487 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 USP10Q14694 798 aaKnown RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 HERC3Q15034 1050 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 INPP5JQ15735 1006 aaPredicted RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 ZKSCAN8Q15776 578 aaPredicted RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 NIPAL1Q6NVV3 410 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 TMEM205Q6UW68 189 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 Q6ZS92 163 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 FRA10AC1Q70Z53 315 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 PRSS41Q7RTY9 318 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 THOC6Q86W42 341 aaKnown RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 PARP9Q8IXQ6 854 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 IQCKQ8N0W5 287 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 AFAP1L2Q8N4X5 818 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 KCT2Q8NC54 265 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 OR51Q1Q8NH59 317 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 PPP4R1Q8TF05 950 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 C8orf44Q96CB5 159 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 THOC3Q96J01 351 aaKnown RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 EGFL8Q99944 293 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 MACROD1Q9BQ69 325 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 MESP1Q9BRJ9 268 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 ZBTB20Q9HC78 741 aaPredicted RBP14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 ZNF160Q9HCG1 818 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 ZFP69BQ9UJL9 534 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 MKL2Q9ULH7 1088 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 KCNE2Q9Y6J6 123 aa14.08□□□□□ -0.16
SMIM11A-203ENST00000399299 NDUFS4O43181 175 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 VPS4BO75351 444 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 STMN1P16949 149 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 IL10P22301 178 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 STX2P32856 288 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SPRP35270 261 aaPredicted RBP14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SCTRP47872 440 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SLC6A12P48065 614 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 EFNA3P52797 238 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 ATP6V0D1P61421 351 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 AP2B1P63010 937 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SKP1P63208 163 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 REEP5Q00765 189 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 MEF2AQ02078 507 aaPredicted RBP14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 TGFBIQ15582 683 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 WHAMMP3Q1A5X7 153 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 PLEKHN1Q494U1 663 aaPredicted RBP14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 CDKL4Q5MAI5 379 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 CATSPEREQ5SY80 951 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 GRTP1Q5TC63 336 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 C8orf74Q6P047 294 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 NXPE4Q6UWF7 544 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 RIPOR1Q6ZS17 1223 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 CCDC25Q86WR0 208 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 PDSS2Q86YH6 399 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 KBTBD2Q8IY47 623 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 TCAIMQ8N3R3 496 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 ZCCHC10Q8TBK6 192 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 NT5CQ8TCD5 201 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 RHBDF1Q96CC6 855 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 TSNARE1Q96NA8 513 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 WDR77Q9BQA1 342 aaPredicted RBP14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 AIF1LQ9BQI0 150 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 VN1R1Q9GZP7 353 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 ZNF700Q9H0M5 742 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SPNS1Q9H2V7 528 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 EPS8L2Q9H6S3 715 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 CAB39LQ9H9S4 337 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 LUZP4Q9P127 313 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 VPS4AQ9UN37 437 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 SLC22A14Q9Y267 594 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 DOPEY2Q9Y3R5 2298 aa14.07□□□□□ -0.16
SMIM11A-203ENST00000399299 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 SGK494L7N484 410 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 KLHL18O94889 574 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 SERPINA7P05543 415 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 PRR35P0CG20 571 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 CCDC166P0CW27 439 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 C8orf89P0DMQ9 161 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 ALOX12P18054 663 aa14.06□□□□□ -0.16
SMIM11A-203ENST00000399299 XCR1P46094 333 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms