RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SPNS2Q8IVW8 549 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 TAGAPQ8N103 731 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 LGI4Q8N135 537 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 D2HGDHQ8N465 521 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 LILRA3Q8N6C8 439 aaPredicted RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 ARL6IP6Q8N6S5 226 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 PIK3C3Q8NEB9 887 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 OR2L8Q8NGY9 312 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 KIF18AQ8NI77 898 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 ASB11Q8WXH4 323 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 UTP4Q969X6 686 aaKnown RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SPSB4Q96A44 273 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 KIAA1143Q96AT1 154 aaPredicted RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SNF8Q96H20 258 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 RIOK2Q9BVS4 552 aaKnown RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 YIPF2Q9BWQ6 316 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 TLR10Q9BXR5 811 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 TRIM7Q9C029 511 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SLC26A1Q9H2B4 701 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 MANSC1Q9H8J5 431 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 AKTIPQ9H8T0 292 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 EPB41L5Q9HCM4 733 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SPATS2LQ9NUQ6 558 aaKnown RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SIDT1Q9NXL6 827 aaKnown RBP3.64□□□□□ -1.83
UBE3A-202ENST00000397954 COPG2Q9UBF2 871 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 NFU1Q9UMS0 254 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 RABL2BQ9UNT1 228 aa3.64□□□□□ -1.83
UBE3A-202ENST00000397954 SLC5A10A0PJK1 596 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FITM1A5D6W6 292 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A18PA6NE21 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A16PA6NEW6 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A9PA6NNJ1 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A5PA8MXJ8 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 MYO1CO00159 1063 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 INPP4BO15327 924 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SLC31A1O15431 190 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CSO75390 466 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 VPS26AO75436 327 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ZBTB11O95625 1053 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 VIPP01282 170 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A15PP0C7V4 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM90A14PP0C7W9 464 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 UBL4AP11441 157 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PEPDP12955 493 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ITGAXP20702 1163 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ARL3P36405 182 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 LMAN1P49257 510 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 RRADP55042 308 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 HHEXQ03014 270 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CYP2A13Q16696 494 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 UBAP2Q5T6F2 1119 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 GPRC6AQ5T6X5 926 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 TXNRD3NBQ6F5E7 133 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM45BPQ6NSW5 357 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ARMC6Q6NXE6 501 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PRMT9Q6P2P2 845 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 RNF165Q6ZSG1 346 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SYVN1Q86TM6 617 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 APLFQ8IW19 511 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 TRIM48Q8IWZ4 208 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SLC35F3Q8IY50 421 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 DND1Q8IYX4 353 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CEP112Q8N8E3 955 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 KYQ8NBH2 561 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OR4L1Q8NH43 312 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OR5K2Q8NHB8 316 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FAM45AQ8TCE6 357 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 PHOSPHO1Q8TCT1 267 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CDKL2Q92772 493 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 VPS33AQ96AX1 596 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CXorf40BQ96DE9 158 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 C9orf72Q96LT7 481 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ABHD1Q96SE0 405 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 OSBPL9Q96SU4 736 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 LGMNQ99538 433 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SLC38A3Q99624 504 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 HAUS8Q9BT25 410 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 NLNQ9BYT8 704 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ROGDIQ9GZN7 287 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 MS4A7Q9GZW8 240 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 P2RY12Q9H244 342 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 EHD1Q9H4M9 534 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 COG4Q9H9E3 785 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 FGF22Q9HCT0 170 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ASCL3Q9NQ33 180 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 MBNL1Q9NR56 388 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SEMA3GQ9NS98 782 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 C14orf105Q9NVL8 296 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 POLR3BQ9NW08 1133 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ARGLU1Q9NWB6 273 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 TRMT1Q9NXH9 659 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 KCMF1Q9P0J7 381 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 POMT2Q9UKY4 750 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 MKL2Q9ULH7 1088 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ZNF148Q9UQR1 794 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 RCE1Q9Y256 329 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 CHKBQ9Y259 395 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 SAR1BQ9Y6B6 198 aa3.63□□□□□ -1.83
UBE3A-202ENST00000397954 ATXN2Q99700 1313 aaKnown RBP3.63□□□□□ -1.83
UBE3A-202ENST00000397954 F5P12259 2224 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms