RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PCDHGA4Q9Y5G9 962 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 A8MU76 341 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 AGRPO00253 132 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 UBOX5O94941 541 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 TBX6O95947 436 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-204ENST00000397443 HSD3B1P14060 373 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 HSD3B2P26439 372 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 ZNF33BQ06732 778 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 NR1D2Q14995 579 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 RPS6KA2Q15349 733 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 FRMPD2BQ6IN97 320 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 ZFAND4Q86XD8 727 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 TREML1Q86YW5 311 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 HOMEZQ8IX15 550 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 C1orf52Q8N6N3 182 aaKnown RBP20.26■□□□□ 0.83
CPNE1-204ENST00000397443 C19orf47Q8N9M1 422 aaKnown RBP20.26■□□□□ 0.83
CPNE1-204ENST00000397443 OR6C4Q8NGE1 309 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 CMTM7Q96FZ5 175 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 FAM60AQ9NP50 221 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 SOHLH2Q9NX45 425 aa20.26■□□□□ 0.83
CPNE1-204ENST00000397443 LOC105369274A0A096LPK9 316 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 IGHV5-51A0A0C4DH38 117 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 LOC102723532A0A0G2JNH3 316 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 SERTM1A2A2V5 107 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 C9JVG2 144 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 GBAP04062 536 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 EIF2S1P05198 315 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 RPLP0P05388 317 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 ZNF883P0CG24 379 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CKMT1AP12532 417 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 SEPHS1P49903 392 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 RPS15AP62244 130 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 EMX2Q04743 252 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 ACSM2AQ08AH3 577 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 ACSM2BQ68CK6 577 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 OGFOD2Q6N063 350 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 DGLUCYQ7Z3D6 616 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 SPATA19Q7Z5L4 167 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 OR4N4Q8N0Y3 316 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 MFSD9Q8NBP5 474 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CLHC1Q8NHS4 586 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CREB3L4Q8TEY5 395 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 NAT6Q93015 286 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CNDP2Q96KP4 475 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CCDC106Q9BWC9 280 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 SORBS1Q9BX66 1292 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 PARD6AQ9NPB6 346 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 C1GALT1Q9NS00 363 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 BAIAP2L1Q9UHR4 511 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 A0A0G2JN53 185 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 FKBP9O95302 570 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 G6PDP11413 515 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 PTX3P26022 381 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 STX1BP61266 288 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CCL7P80098 99 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 C10orf62Q5T681 223 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CACHD1Q5VU97 1274 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 PLXDC1Q8IUK5 500 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 TTLQ8NG68 377 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 OR9I1Q8NGQ6 314 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 SLC13A3Q8WWT9 602 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 ZFYVE21Q9BQ24 234 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 MS4A8Q9BY19 250 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 NOP53Q9NZM5 478 aaKnown RBP20.25■□□□□ 0.83
CPNE1-204ENST00000397443 ADGRE2Q9UHX3 823 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 DLGAP4Q9Y2H0 992 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 AP1M2Q9Y6Q5 423 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 CAPN7Q9Y6W3 813 aa20.25■□□□□ 0.83
CPNE1-204ENST00000397443 TLCD2A6NGC4 264 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 RTCAO00442 366 aaKnown RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 HCRTR1O43613 425 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 CBX6O95503 412 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 HNRNPH1P31943 449 aaKnown RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 TBL3Q12788 808 aaKnown RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 KIAA0040Q15053 153 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 INAVAQ3KP66 663 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 KHDRBS2Q5VWX1 349 aaKnown RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 PAOXQ6QHF9 649 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 VN1R4Q7Z5H5 301 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 LIX1Q8N485 282 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 POU5F2Q8N7G0 328 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 CDC26Q8NHZ8 85 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 SERPINI1Q99574 410 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 EPB41L1Q9H4G0 881 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 KLHL31Q9H511 634 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 ZNF385DQ9H6B1 395 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 TMEM9BQ9NQ34 198 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 AIG1Q9NVV5 245 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 NMRK1Q9NWW6 199 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 ANKMY1Q9P2S6 941 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 EPHA6Q9UF33 1036 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 PILRAQ9UKJ1 303 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 EIF3LQ9Y262 564 aaKnown RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 TSC22D4Q9Y3Q8 395 aa20.24■□□□□ 0.83
CPNE1-204ENST00000397443 ZFHX2Q9C0A1 2572 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-204ENST00000397443 FLRT2O43155 660 aa20.23■□□□□ 0.83
CPNE1-204ENST00000397443 LDOC1O95751 146 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-204ENST00000397443 IDO1P14902 403 aa20.23■□□□□ 0.83
CPNE1-204ENST00000397443 PNLIPP16233 465 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms