RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 IL6P05231 212 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 PRPS1L1P21108 318 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 DUSP3P51452 185 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 DIO3P55073 304 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 CLDN8P56748 225 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 KCNK10P57789 538 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 RGS1Q08116 209 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 TBL3Q12788 808 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 BNIP3Q12983 259 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 SQSTM1Q13501 440 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 RCAN2Q14206 197 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 ADPRMQ3LIE5 342 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 AGKQ53H12 422 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 ZC3H12BQ5HYM0 836 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 FIGLAQ6QHK4 219 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 IKBIPQ70UQ0 350 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 PLXDC1Q8IUK5 500 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 KYQ8NBH2 561 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 DNAJB8Q8NHS0 232 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 RGMAQ96B86 450 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 KLHL29Q96CT2 875 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 ROGDIQ9GZN7 287 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 MCM8Q9UJA3 840 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 DNAJC8O75937 253 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 KRT16P08779 473 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 SLC35G6P0C7Q6 338 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 GIMD1P0DJR0 217 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 G6PDP11413 515 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 BCKDHAP12694 445 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 MPLP40238 635 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 TRA2BP62995 288 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 LRRC74AQ0VAA2 488 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 NR0B2Q15466 257 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 NIPAL1Q6NVV3 410 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 BLOC1S3Q6QNY0 202 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 HACD2Q6Y1H2 254 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 MSANTD1Q6ZTZ1 278 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 NATD1Q8N6N6 113 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 ANKRD53Q8N9V6 530 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 CAMKVQ8NCB2 501 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 TESCQ96BS2 214 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 PRR11Q96HE9 360 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 AHCYL2Q96HN2 611 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 RAB3IPQ96QF0 476 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 PRPF18Q99633 342 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 ZFYVE21Q9BQ24 234 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 BTBD10Q9BSF8 475 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 TBC1D10AQ9BXI6 508 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 NLNQ9BYT8 704 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 DPY30Q9C005 99 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 CCDC167Q9P0B6 97 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 PADI4Q9UM07 663 aa18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 POLR3HQ9Y535 204 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-204ENST00000397404 A0A088AWK7 358 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 TLCD2A6NGC4 264 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 TOX3O15405 576 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ZSCAN9O15535 394 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF10P21506 573 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 TIA1P31483 386 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■□□□□ 8.4
TSPAN4-204ENST00000397404 RAP1GDS1P52306 607 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ATXN3P54252 364 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 NCALDP61601 193 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ZIC1Q15915 447 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 C16orf89Q6UX73 402 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 RNF44Q7L0R7 432 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ASRGL1Q7L266 308 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 SLC35F3Q8IY50 421 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF740Q8NDX6 193 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 NT5CQ8TCD5 201 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 PROKR1Q8TCW9 393 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 CREB3L4Q8TEY5 395 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 RERGQ96A58 199 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ROPN1LQ96C74 230 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 MTERF3Q96E29 417 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 TCTN2Q96GX1 697 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 APIPQ96GX9 242 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 APOLD1Q96LR9 279 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 C1orf50Q9BV19 199 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 KCNH6Q9H252 994 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 SPNS1Q9H2V7 528 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 G3BP2Q9UN86 482 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 A0A1W2PP18 115 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 HAT1O14929 419 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ANGPT2O15123 496 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 GYG2O15488 501 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 CFLARO15519 480 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 GUCY1B2O75343 617 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 MAGP20916 626 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 POLR2JP52435 117 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 MEF2AQ02078 507 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF763Q0D2J5 394 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 MMEL1Q495T6 779 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 PLA2G2CQ5R387 149 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 WDR74Q6RFH5 385 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 VN1R5Q7Z5H4 357 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 R3HCC1LQ7Z5L2 792 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 NUDT13Q86X67 352 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 SNX32Q86XE0 403 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 KMT5CQ86Y97 462 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms