RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MUM1Q2TAK8 710 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 UNC50Q53HI1 259 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ZNF678Q5SXM1 525 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 GARNL3Q5VVW2 1013 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 RPS27LQ71UM5 84 aaKnown RBP18.3■□□□□ 0.52
HOXA9-202ENST00000396345 TRPV3Q8NET8 790 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 PROKR1Q8TCW9 393 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 TCP10LQ8TDR4 215 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 PPP4R1Q8TF05 950 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 GBP5Q96PP8 586 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 FAM111AQ96PZ2 611 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 TMEM237Q96Q45 408 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 MACROD1Q9BQ69 325 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 DPH2Q9BQC3 489 aaPredicted RBP18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ACTR8Q9H981 624 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 AKIRIN1Q9H9L7 192 aaPredicted RBP18.3■□□□□ 0.52
HOXA9-202ENST00000396345 SEMA4BQ9NPR2 832 aaPredicted RBP18.3■□□□□ 0.52
HOXA9-202ENST00000396345 SLC17A7Q9P2U7 560 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ZMIZ1Q9ULJ6 1067 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ACTL7BQ9Y614 415 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ZFHX4Q86UP3 3567 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 MAP1BP46821 2468 aaKnown RBP18.3■□□□□ 0.52
HOXA9-202ENST00000396345 DMXL2Q8TDJ6 3036 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 LOC101059948A0A1B0GTJ6 334 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 A0A1B0GX78 115 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 OR7A17O14581 309 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 NDUFS4O43181 175 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 TYROBPO43914 113 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 SUPT7LO94864 414 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 MED26O95402 600 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 SLC35G6P0C7Q6 338 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 AGXTP21549 392 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 ARL1P40616 181 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 CYP4F2P78329 520 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 RGS1Q08116 209 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 PWP1Q13610 501 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 RBBP7Q16576 425 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 NDUFA9Q16795 377 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 MANEAQ5SRI9 462 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 LIPJQ5W064 366 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 ZNF385CQ66K41 422 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 GRHL2Q6ISB3 625 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 FAM199XQ6PEV8 388 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 VASH2Q86V25 355 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 MYLK4Q86YV6 388 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 SPACA3Q8IXA5 215 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 TTLQ8NG68 377 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 UBE2E3Q969T4 207 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 L3HYPDHQ96EM0 354 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 C10orf90Q96M02 699 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 TMBIM4Q9HC24 238 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 SSU72Q9NP77 194 aaKnown RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 ACSS2Q9NR19 701 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 COPG2Q9UBF2 871 aa18.29■□□□□ 0.52
HOXA9-202ENST00000396345 ZNF490Q9ULM2 529 aaPredicted RBP18.29■□□□□ 0.52
HOXA9-202ENST00000396345 ANKDD1BA6NHY2 528 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 UGDHO60701 494 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 CLDN9O95484 217 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 GSTM2P28161 218 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 HNF4AP41235 474 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 CDH13P55290 713 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 DCDP81605 110 aaKnown RBP18.28■□□□□ 0.52
HOXA9-202ENST00000396345 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 MED27Q6P2C8 311 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 ZNF517Q6ZMY9 492 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-202ENST00000396345 ARHGEF39Q8N4T4 335 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 KCT2Q8NC54 265 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 OR52B6Q8NGF0 335 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 NT5CQ8TCD5 201 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 CT55Q8WUE5 264 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 KIAA1143Q96AT1 154 aaPredicted RBP18.28■□□□□ 0.52
HOXA9-202ENST00000396345 MOCOSQ96EN8 888 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 NTMT1Q9BV86 223 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 CHST8Q9H2A9 424 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 ZBTB26Q9HCK0 441 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 OXSMQ9NWU1 459 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 CROTQ9UKG9 612 aa18.28■□□□□ 0.52
HOXA9-202ENST00000396345 A0A087WV48 116 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 UQCRHLA0A096LP55 91 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 AGPSO00116 658 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 UQCRHP07919 91 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 ATXN8OSP0DMR3 200 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 TSPAN8P19075 237 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 TCN2P20062 427 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 DLSTP36957 453 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 DNAJB13P59910 316 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 CLCQ05315 142 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 PCLAFQ15004 111 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 NKAIN1Q4KMZ8 207 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 BROXQ5VW32 411 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 TMEM214Q6NUQ4 689 aaKnown RBP18.27■□□□□ 0.52
HOXA9-202ENST00000396345 MILR1Q7Z6M3 343 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 C10orf107Q8IVU9 208 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 DTWD1Q8N5C7 304 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 METTL27Q8N6F8 245 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-202ENST00000396345 CCNYL1Q8N7R7 359 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 L3MBTL4Q8NA19 623 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 TRPC4APQ8TEL6 797 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms