RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 Q9Y3F1 56 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ENPP3O14638 875 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 RCBTB2O95199 551 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 INHAP05111 366 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ERVK-21P61565 698 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PTGR1Q14914 329 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ARL9Q6T311 187 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ZSWIM9Q86XI8 627 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 CMTR2Q8IYT2 770 aaKnown RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 OR14C36Q8NHC7 312 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 BRD7Q9NPI1 651 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PEAK1Q9H792 1746 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 FOXD2O60548 495 aaPredicted RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF3P17036 446 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 NT5EP21589 574 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF81P51508 661 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 TSPAN5P62079 268 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 RPP38P78345 283 aaKnown RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ATXN7L2Q5T6C5 722 aaPredicted RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 TMEM220Q6QAJ8 160 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF782Q6ZMW2 699 aaPredicted RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 SDR16C5Q8N3Y7 309 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 TMED9Q9BVK6 235 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 FXYD6-FXYD2A0A087WZ82 144 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 GIMD1P0DJR0 217 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ITPKBP27987 946 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 SERINC3Q13530 473 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF267Q14586 743 aaPredicted RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF767PQ75MW2 155 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 AMIGO1Q86WK6 493 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 NFKBIDQ8NI38 313 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF597Q96LX8 424 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 FXYD6Q9H0Q3 95 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 SIX4Q9UIU6 781 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 A0A1W2PRQ8 180 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 LRRC72A6NJI9 287 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 GATBO75879 557 aaKnown RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 GRK6P43250 576 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 RPA4Q13156 261 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
SIN3A-203ENST00000394949 FBXL22Q6P050 247 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 SCAMP5Q8TAC9 235 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 CD244Q9BZW8 370 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 TMEM45AQ9NWC5 275 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 UNC50Q53HI1 259 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 RFT1Q96AA3 541 aa16.69■□□□□ 0.26
SIN3A-203ENST00000394949 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 CD1DP15813 335 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 WASP42768 502 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 ST3GAL3Q11203 375 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 PRSS48Q7RTY5 328 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF615Q8N8J6 731 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 WFIKKN2Q8TEU8 576 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 MGLLQ99685 303 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 DHRS4Q9BTZ2 278 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 IFT52Q9Y366 437 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 SP140Q13342 867 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 SLBPQ14493 270 aaKnown RBP eCLIP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 NLE1Q9NVX2 485 aaPredicted RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF451Q9Y4E5 1061 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 MAGED1Q9Y5V3 778 aaPredicted RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 CEPT1Q9Y6K0 416 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 LRRN3E7EW58 273 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 MATN4O95460 622 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 SLC35G6P0C7Q6 338 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 MPIP34949 423 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 PRKCZQ05513 592 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 RBBP4Q09028 425 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 GRB7Q14451 532 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 VMACQ2NL98 169 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 XKR4Q5GH76 650 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 C1orf220Q5T0J3 134 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 DCDC5Q6ZRR9 648 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 HFE2Q6ZVN8 426 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF598Q86UK7 904 aaKnown RBP16.68■□□□□ 0.26
SIN3A-203ENST00000394949 ACTR6Q9GZN1 396 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 LRRN3Q9H3W5 708 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 HS3ST4Q9Y661 456 aa16.68■□□□□ 0.26
SIN3A-203ENST00000394949 A8MV72 311 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 LRRC66Q68CR7 880 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 BTN2A1Q7KYR7 527 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 TSPYL5Q86VY4 417 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 PYCR2Q96C36 320 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 KCNK13Q9HB14 408 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 FOLH1BQ9HBA9 442 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 NUDT15Q9NV35 164 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 FBXW2Q9UKT8 454 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 CDH10Q9Y6N8 788 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 WRBO00258 174 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 NPRL3Q12980 569 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 CLEC12AQ5QGZ9 265 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 PAQR7Q86WK9 346 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms