RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 OR4D10Q8NGI6 311 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 OR2AJ1Q8NGZ0 328 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 OR1L3Q8NH93 324 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RNASE11Q8TAA1 199 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC26Q8TAB7 109 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TBCKQ8TEA7 893 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF128Q8TEB7 428 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 UTP15Q8TED0 518 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C2CD4CQ8TF44 421 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CLEC4CQ8WTT0 213 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 APOBEC4Q8WW27 367 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNE4Q8WWG9 221 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ESR2Q92731 530 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HDAC2Q92769 488 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SNAPC3Q92966 411 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C11orf52Q96A22 123 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 COA7Q96BR5 231 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RHBDF1Q96CC6 855 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GRAMD1AQ96CP6 724 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PABPC5Q96DU9 382 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GRAMD2BQ96HH9 432 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RBM17Q96I25 401 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF625Q96I27 306 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SUCLG2Q96I99 432 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM101Q96IK0 257 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CEP170P1Q96L14 293 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM218AQ96MZ4 157 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF157Q96PX1 679 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC22A12Q96S37 553 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 STRBPQ96SI9 672 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MBOAT4Q96T53 435 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LPAR4Q99677 370 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NPAS2Q99743 824 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TSG101Q99816 390 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MYD88Q99836 296 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PRRT1Q99946 306 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CITED2Q99967 270 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MXRA8Q9BRK3 442 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NICN1Q9BSH3 213 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NDFIP1Q9BT67 221 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C19orf24Q9BVV8 132 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 COLEC11Q9BWP8 271 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PAPOLGQ9BWT3 736 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 STK31Q9BXU1 1019 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HDHD5Q9BXW7 423 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF717Q9BY31 904 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ANGPTL4Q9BY76 406 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR61Q9BZJ8 451 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ARRDC1-AS1Q9H2J1 176 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNN2Q9H2S1 579 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM245Q9H330 911 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 OR51J1Q9H342 316 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CPVLQ9H3G5 476 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HRH4Q9H3N8 390 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TPK1Q9H3S4 243 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ST6GALNAC4Q9H4F1 302 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZHX3Q9H4I2 956 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC32A1Q9H598 525 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KIF9Q9HAQ2 790 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SMURF2Q9HAU4 748 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LY9Q9HBG7 655 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBTB26Q9HCK0 441 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 POLD4Q9HCU8 107 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 APMAPQ9HDC9 416 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IL1RAPL2Q9NP60 686 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 AMBNQ9NP70 447 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ACKR4Q9NPB9 350 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR108Q9NPR9 543 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HEYLQ9NQ87 328 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HINT3Q9NQE9 182 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MIEF1Q9NQG6 463 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ENTPD7Q9NQZ7 604 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SDR39U1Q9NRG7 319 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC22A11Q9NSA0 550 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FGF21Q9NSA1 209 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP8A2Q9NTI2 1148 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MTMR10Q9NXD2 777 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SNTG2Q9NY99 539 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RBAKQ9NYW8 714 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC25A10Q9UBX3 287 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IL20RAQ9UHF4 553 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MID2Q9UJV3 735 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXO9Q9UK97 447 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MCTS1Q9ULC4 181 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MGAT4AQ9UM21 535 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NFU1Q9UMS0 254 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SMC3Q9UQE7 1217 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF148Q9UQR1 794 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CARD8Q9Y2G2 431 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FLVCR1Q9Y5Y0 555 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CPQQ9Y646 472 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SELENOKQ9Y6D0 94 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IVNS1ABPQ9Y6Y0 642 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 U3KQA8 63 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 WNK2Q9Y3S1 2297 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FLNBO75369 2602 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 WASHC2AQ641Q2 1341 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SEC16AO15027 2179 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms