RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MBLAC2Q68D91 279 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 ANKRD26P1Q6NSI1 321 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 PMM1Q92871 262 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 ZUFSPQ96AP4 578 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 B3GNT4Q9C0J1 378 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 P2RX2Q9UBL9 471 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 KLF15Q9UIH9 416 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 FCF1Q9Y324 198 aaKnown RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 A0A1W2PP18 115 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 MBLAC1A4D2B0 266 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 PI15O43692 258 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 IFNA21P01568 189 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 EDNRAP25101 427 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 GNG2P59768 71 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 VAMP2P63027 116 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 HMGCS1Q01581 520 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 MINDY4Q4G0A6 757 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 KLHL26Q53HC5 615 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 LRRC69Q6ZNQ3 347 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 HDAC2Q92769 488 aaKnown RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 VPS29Q9UBQ0 182 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SIX4Q9UIU6 781 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 BACE2Q9Y5Z0 518 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 TRBC2A0A5B9 178 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 CYB5AP00167 134 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 NCBP2P52298 156 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNPH-201ENST00000381867 PRKCDQ05655 676 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 UPP1Q16831 310 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 FAM129CQ86XR2 697 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 NXPE2Q96DL1 559 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 RDH12Q96NR8 316 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 ELOA3DA6NLF2 546 aaPredicted RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 DUXAA6NLW8 204 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 KAT7O95251 611 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 HOXD13P35453 343 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 CHRNA4P43681 627 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 MAN2A2P49641 1150 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 RPA4Q13156 261 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ELOA3BQ3SY89 546 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 TBRG1Q3YBR2 411 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 SH3PXD2AQ5TCZ1 1133 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 TIFABQ6ZNK6 161 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 TAS1R3Q7RTX0 852 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 NUP54Q7Z3B4 507 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ELOA3Q8NG57 546 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 RBM18Q96H35 190 aaKnown RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 TMEM80Q96HE8 168 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 NDC1Q9BTX1 674 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 METTL8Q9H825 291 aaKnown RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 EMC3Q9P0I2 261 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ST14Q9Y5Y6 855 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZNF208O43345 1280 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 CSN2P05814 226 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 GALTP07902 379 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 DGKQP52824 942 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 MPP2Q14168 576 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 OCLNQ16625 522 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZNF423Q2M1K9 1284 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 TMEM220Q6QAJ8 160 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 MBOAT1Q6ZNC8 495 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 MRPL10Q7Z7H8 261 aaKnown RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 SLC38A3Q99624 504 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZSCAN5AQ9BUG6 496 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 TM9SF3Q9HD45 589 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 M0R233 179 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 CREG1O75629 220 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
SNPH-201ENST00000381867 GJA5P36382 358 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 OR4F3Q6IEY1 312 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 HMBOX1Q6NT76 420 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 DENND6BQ8NEG7 585 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 SLC29A3Q9BZD2 475 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
SNPH-201ENST00000381867 SCAMP1O15126 338 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 RAB36O95755 333 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 NPPAP01160 153 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 OPN1SWP03999 348 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 GNSP15586 552 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 ZNF20P17024 532 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 CASP9P55211 416 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 ARFRP1Q13795 201 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 ZNF267Q14586 743 aaPredicted RBP13.56□□□□□ -0.24
SNPH-201ENST00000381867 ZNF181Q2M3W8 571 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
SNPH-201ENST00000381867 LRRC70Q7Z2Q7 622 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms