RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ENAMQ9NRM1 1142 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 IRAK4Q9NWZ3 460 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 FOXJ2Q9P0K8 574 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 ZFP69BQ9UJL9 534 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 FITM1A5D6W6 292 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 FFAR3O14843 346 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 GPR42O15529 346 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ZSCAN9O15535 394 aaPredicted RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 NDUFS4O43181 175 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 SCRG1O75711 98 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 SERPINE1P05121 402 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 SERPIND1P05546 499 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 CHRNGP07510 517 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 NEFHP12036 1026 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ZNF28P17035 718 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 PKNOX1P55347 436 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 SNRPNP63162 240 aaKnown RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 CYP4F2P78329 520 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 GPS2Q13227 327 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 RCN2Q14257 317 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 GGTA1PQ4G0N0 100 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 MED27Q6P2C8 311 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ASPGQ86U10 573 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 GPR135Q8IZ08 494 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 RNF175Q8N4F7 328 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ZNF655Q8N720 491 aaPredicted RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 CDYL2Q8N8U2 506 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 SLC38A9Q8NBW4 561 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 KCNA7Q96RP8 456 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 TRMOQ9BU70 441 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 RHBGQ9H310 441 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ASCL3Q9NQ33 180 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 TRPS1Q9UHF7 1281 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
SMN1-202ENST00000380707 STK38LQ9Y2H1 464 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 PCDHGA3Q9Y5H0 932 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 PCDHGA11Q9Y5H2 935 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 AK5Q9Y6K8 562 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 ZZEF1O43149 2961 aa12.08□□□□□ -0.48
SMN1-202ENST00000380707 MED19A0JLT2 244 aaPredicted RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 CDRT15L2A8MXV6 281 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 NVLO15381 856 aaKnown RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 ZNF749O43361 778 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 ITM2AO43736 263 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 BRINP1O60477 761 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 LYPLA1O75608 230 aaPredicted RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 MED26O95402 600 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 NTRK1P04629 796 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 CAPN1P07384 714 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 PCNAP12004 261 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 RBMS1P29558 406 aaKnown RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 SLC5A2P31639 672 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 GCGRP47871 477 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 ATP1A2P50993 1020 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 NEK2P51955 445 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 FOXA1P55317 472 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 HYAL2Q12891 473 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 PWP1Q13610 501 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 PRTGQ2VWP7 1150 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 TCHHL1Q5QJ38 904 aaPredicted RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 TMEM164Q5U3C3 297 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 TLDC1Q6P9B6 456 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 CUZD1Q86UP6 607 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 TMEM126BQ8IUX1 230 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 ARHGEF39Q8N4T4 335 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 KCT2Q8NC54 265 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 TRPV3Q8NET8 790 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 TTLQ8NG68 377 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 HUS1BQ8NHY5 278 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 WDR20Q8TBZ3 569 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 UBE2E3Q969T4 207 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 MTFMTQ96DP5 389 aaKnown RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 TEFMQ96QE5 360 aaKnown RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 MTERF1Q99551 399 aaKnown RBP12.07□□□□□ -0.48
SMN1-202ENST00000380707 ZPBPQ9BS86 351 aa12.07□□□□□ -0.48
SMN1-202ENST00000380707 HYKKA2RU49 373 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 ANKDD1BA6NHY2 528 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
SMN1-202ENST00000380707 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 SLC35G6P0C7Q6 338 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 GRK2P25098 689 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 SERPINB5P36952 375 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 ABCE1P61221 599 aaKnown RBP12.06□□□□□ -0.48
SMN1-202ENST00000380707 SHC2P98077 582 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 GALNT1Q10472 559 aaPredicted RBP12.06□□□□□ -0.48
SMN1-202ENST00000380707 BST1Q10588 318 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 STX3Q13277 289 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 DDX39BQ13838 428 aaKnown RBP12.06□□□□□ -0.48
SMN1-202ENST00000380707 GRM7Q14831 915 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 FRG2Q64ET8 278 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
SMN1-202ENST00000380707 CLEC6AQ6EIG7 209 aa12.06□□□□□ -0.48
SMN1-202ENST00000380707 ERMP1Q7Z2K6 904 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms