RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 VPS26BQ4G0F5 336 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 DRICH1Q6PGQ1 229 aaPredicted RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 ANGPTL6Q8NI99 470 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 PKP2Q99959 881 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 BCL7BQ9BQE9 202 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 KATNBL1Q9H079 304 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 PRDM12Q9H4Q4 367 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 TCF7L1Q9HCS4 588 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 ADGRE2Q9UHX3 823 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 SVILO95425 2214 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 FAM189A1O60320 539 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 PAK4O96013 591 aaPredicted RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 GIMD1P0DJR0 217 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 C7P10643 843 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 CERS1P27544 350 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 CST5P28325 142 aaPredicted RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 SLC5A2P31639 672 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 CASP3P42574 277 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 RNASEH2BQ5TBB1 312 aaKnown RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 PIK3R6Q5UE93 754 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 SLC35F3Q8IY50 421 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 PHTF2Q8N3S3 785 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 CPSF7Q8N684 471 aaKnown RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 RFKQ969G6 155 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 BTN2A3PQ96KV6 586 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 SMOQ99835 787 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 ZDHHC18Q9NUE0 388 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 KLHL28Q9NXS3 571 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 POU2F3Q9UKI9 436 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 SLC38A8A6NNN8 435 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 RHPN2P1A8MT19 583 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 MLYCDO95822 493 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 FABP1P07148 127 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 LUMP51884 338 aaPredicted RBP6.4□□□□□ -1.38
CHD6-203ENST00000373233 CRY1Q16526 586 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 TXNRD3NBQ6F5E7 133 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 C7orf57Q8NEG2 295 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 TRPC4Q9UBN4 977 aa6.4□□□□□ -1.38
CHD6-203ENST00000373233 AIPO00170 330 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 PRMT5O14744 637 aaPredicted RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 TMEM127O75204 238 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 OAS1P00973 400 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 FUCA1P04066 466 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 GPC1P35052 558 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 GRIA1P42261 906 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 RFX3P48380 749 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 FAM214AQ32MH5 1076 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 NATD1Q8N6N6 113 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 TRMOQ9BU70 441 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ADGRE3Q9BY15 652 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ZNF223Q9UK11 482 aaPredicted RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 MFHAS1Q9Y4C4 1052 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 LINC00032P0C843 101 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 RHOAP61586 193 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 HFE2Q6ZVN8 426 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 MRPL10Q7Z7H8 261 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 GPALPP1Q8IXQ4 340 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 SLC39A13Q96H72 371 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 CNDP2Q96KP4 475 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 PELOQ9BRX2 385 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 WDR55Q9H6Y2 383 aaPredicted RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 SAMD4AQ9UPU9 718 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 PRELID3BQ9Y3B1 194 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ZNF236Q9UL36 1845 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ANXA2P2A6NMY6 339 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ADAMDEC1O15204 470 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 LCKP06239 509 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ANXA2P07355 339 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 ALDH3B1P43353 468 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 GDF10P55107 478 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 DAG1Q14118 895 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 IQCCQ4KMZ1 466 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 CREB3L2Q70SY1 520 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 MFSD8Q8NHS3 518 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ADAMTS16Q8TE57 1224 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 SLC35F5Q8WV83 523 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 TAAR8Q969N4 342 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 EXOSC8Q96B26 276 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 FUBP3Q96I24 572 aaKnown RBP eCLIP6.4□□□□□ -1.396e-6■■■■□ 23.4
CHD6-203ENST00000373233 LENG8Q96PV6 779 aaPredicted RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 TMEM209Q96SK2 561 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 C12orf65Q9H3J6 166 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 ABCB8Q9NUT2 735 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 TNPO3Q9Y5L0 923 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 AQP12BA6NM10 295 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.39
CHD6-203ENST00000373233 SLC34A2O95436 690 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 SPATA31D3P0C874 917 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 DDCP20711 480 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 NAE1Q13564 534 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 COL19A1Q14993 1142 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 FAM189A2Q15884 450 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 PIGGQ5H8A4 983 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ANKRD22Q5VYY1 191 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 CNKSR3Q6P9H4 555 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 SPATA31D4Q6ZUB0 917 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 C11orf96Q7Z7L8 435 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 ST8SIA4Q92187 359 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 PLD4Q96BZ4 506 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 FNDC11Q9BVV2 318 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms