RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 WDR34Q96EX3 536 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 ZFYVE19Q96K21 471 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 EXD2Q9NVH0 621 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 LINC01553A4QN01 128 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 FOXE1O00358 373 aaPredicted RBP27.85■■■□□ 2.05
SSBP3-204ENST00000371320 UGT2B11O75310 529 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 NUDT7P0C024 238 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 ADRB3P13945 408 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 FPR1P21462 350 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 DAPP51397 102 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 HIST2H2ACQ16777 129 aaPredicted RBP27.85■■■□□ 2.05
SSBP3-204ENST00000371320 HIST2H2AA3Q6FI13 130 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 PDE12Q6L8Q7 609 aaKnown RBP27.85■■■□□ 2.05
SSBP3-204ENST00000371320 CXorf40BQ96DE9 158 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 MAGED4Q96JG8 741 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 ZNF514Q96K75 400 aaPredicted RBP27.85■■■□□ 2.05
SSBP3-204ENST00000371320 LHPPQ9H008 270 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 CHST8Q9H2A9 424 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 ITM2CQ9NQX7 267 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 A0A1W2PPW3 197 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 TMX2-CTNND1H3BSU7 103 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 POP7O75817 140 aaKnown RBP27.84■■■□□ 2.05
SSBP3-204ENST00000371320 NTRK1P04629 796 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 TMBIM6P55061 237 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 IL1RL1Q01638 556 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 GAB1Q13480 694 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 RGNQ15493 299 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 C10orf62Q5T681 223 aaPredicted RBP27.84■■■□□ 2.05
SSBP3-204ENST00000371320 LAS2Q8IYD9 372 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 TPD52L3Q96J77 140 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 RIBC2Q9H4K1 309 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 DEC1Q9P2X7 70 aa27.84■■■□□ 2.05
SSBP3-204ENST00000371320 KIAA0100Q14667 2235 aaKnown RBP27.84■■■□□ 2.05
SSBP3-204ENST00000371320 SLC1A7O00341 560 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 RNASET2O00584 256 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 HTR1AP08908 422 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 STT3AP46977 705 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 IL5RAQ01344 420 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 TAP2Q03519 686 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ZNF763Q0D2J5 394 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 LRRC74AQ0VAA2 488 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 RAPSNQ13702 412 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ELAVL3Q14576 367 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 CRTC3Q6UUV7 619 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 XKR5Q6UX68 686 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 COMMD6Q7Z4G1 85 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ZNF547Q8IVP9 402 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 REEP4Q9H6H4 257 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 DMRT3Q9NQL9 472 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ZNF282Q9UDV7 671 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 DPP7Q9UHL4 492 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ATP6V1HQ9UI12 483 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 EXO1Q9UQ84 846 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 RWDD3Q9Y3V2 267 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 SAMHD1Q9Y3Z3 626 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 GMEB1Q9Y692 573 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 PIPSLA2A3N6 862 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ABCB1P08183 1280 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 DPTQ07507 201 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 FGD3Q5JSP0 725 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 KDM4DQ6B0I6 523 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 SMG7Q92540 1137 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 ARMC5Q96C12 935 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 THAP11Q96EK4 314 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 PPP1R16AQ96I34 528 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 LINC00615Q96LM1 132 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 BHLHE41Q9C0J9 482 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 TRIT1Q9H3H1 467 aaKnown RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 PDP1Q9P0J1 537 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 FAF1Q9UNN5 650 aaPredicted RBP27.83■■■□□ 2.05
SSBP3-204ENST00000371320 SNX5Q9Y5X3 404 aa27.83■■■□□ 2.05
SSBP3-204ENST00000371320 C17orf113A0A1B0GUU1 675 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 TRIM64BA6NI03 449 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 PAPLNO95428 1278 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 NFATC1O95644 943 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 TGFB1P01137 390 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 ZNF8P17098 575 aaPredicted RBP27.82■■■□□ 2.04
SSBP3-204ENST00000371320 CDK5R2Q13319 367 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 ARMCX6Q7L4S7 300 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 SETD9Q8NE22 299 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 BPIFB6Q8NFQ5 453 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 SLC5A11Q8WWX8 675 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 MAL2Q969L2 176 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 FAM129BQ96TA1 746 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 EHD1Q9H4M9 534 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 DYRK4Q9NR20 520 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 SIRT5Q9NXA8 310 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 SAP18O00422 153 aaKnown RBP27.82■■■□□ 2.04
SSBP3-204ENST00000371320 GBAP04062 536 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 EMP3P54852 163 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 PIGFQ07326 219 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 SIM2Q14190 667 aaPredicted RBP27.82■■■□□ 2.04
SSBP3-204ENST00000371320 NFE2L1Q14494 772 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 ZNF385BQ569K4 471 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 PIWIL3Q7Z3Z3 882 aaKnown RBP27.82■■■□□ 2.04
SSBP3-204ENST00000371320 NAGSQ8N159 534 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 FBLIM1Q8WUP2 373 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 REEP1Q9H902 201 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 CCDC177Q9NQR7 707 aaPredicted RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms