RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GARNL3Q5VVW2 1013 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 RNF219Q5W0B1 726 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SHQ1Q6PI26 577 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GLB1LQ6UWU2 654 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PARP16Q8N5Y8 322 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SPPL2AQ8TCT8 520 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 YIPF6Q96EC8 236 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MS4A4AQ96JQ5 239 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 Q96MT0 163 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 RERGLQ9H628 205 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CLMPQ9H6B4 373 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 THUMPD1Q9NXG2 353 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 B3GNT2Q9NY97 397 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CRLS1Q9UJA2 301 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 OSGIN1Q9UJX0 560 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SAMD4AQ9UPU9 718 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 FCF1Q9Y324 198 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DHRS7Q9Y394 339 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC28A1O00337 649 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MANBAO00462 879 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PAHP00439 452 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PDYNP01213 254 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 OPN1SWP03999 348 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TRAPPC2P0DI81 140 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TRAPPC2BP0DI82 140 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF7P17097 686 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAPKAPK2P49137 400 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 COX10Q12887 443 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAP2K5Q13163 448 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPR50Q13585 617 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAD2L1BPQ15013 274 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PCBP2Q15366 365 aaKnown RBP eCLIP7.97□□□□□ -1.137e-7■■■■■ 29.1
CDC42SE1-201ENST00000357235 GPAT3Q53EU6 434 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 USP39Q53GS9 565 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SYT6Q5T7P8 510 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 KIAA1614Q5VZ46 1190 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 METTL3Q86U44 580 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DNASE1L2Q92874 299 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAL2Q969L2 176 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MSANTD3Q96H12 275 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PARK7Q99497 189 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 BEX2Q9BXY8 128 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ACPTQ9BZG2 426 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DUSP21Q9H596 190 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 EXOSC4Q9NPD3 245 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TMPRSS11EQ9UL52 423 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 RNF6Q9Y252 685 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PCDHGB6Q9Y5F9 930 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRSS21Q9Y6M0 314 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MEIOCA2RUB1 952 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DRGXA6NNA5 263 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CLIC1O00299 241 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CAPN5O15484 640 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PI15O43692 258 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 STK16O75716 305 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ENGP17813 658 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ITPKAP23677 461 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CA5AP35218 305 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SOX9P48436 509 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 BLVRAP53004 296 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPR85P60893 370 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 RHOAP61586 193 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CD83Q01151 205 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 FAPQ12884 760 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CAMK2GQ13555 558 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GALEQ14376 348 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MFSD13AQ14CX5 517 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 FAM110CQ1W6H9 321 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 BCL7AQ4VC05 210 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 NRARPQ7Z6K4 114 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PLCZ1Q86YW0 608 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SAMD14Q8IZD0 417 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ADGRG2Q8IZP9 1017 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR8H2Q8N162 312 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC7A6Q92536 515 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 KCNS3Q9BQ31 491 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ITPAQ9BY32 194 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRRG3Q9BZD7 231 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CD244Q9BZW8 370 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR51E2Q9H255 320 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CRISPLD1Q9H336 500 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PDFQ9HBH1 243 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TAS2R16Q9NYV7 291 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 STOML2Q9UJZ1 356 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SNX6Q9UNH7 406 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAN2B2Q9Y2E5 1009 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 GRXCR2A6NFK2 248 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 H0YC42 278 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 ERN1O75460 977 aaKnown RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 GJB5O95377 273 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 ITGA2P17301 1181 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 DNAJA1P31689 397 aaKnown RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC15A1P46059 708 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC11A2P49281 568 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRKCDQ05655 676 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 NPRL3Q12980 569 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms