RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-201ENST00000356083 C6orf183Q5T699 404 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 CYP8B1Q9UNU6 501 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF860A6NHJ4 632 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 HTR1AP08908 422 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 SOX2P48431 317 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 CHRFAM7AQ494W8 412 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 IQCCQ4KMZ1 466 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PRRT3Q5FWE3 981 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 TMEM69Q5SWH9 247 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 CSPG4P5Q96PW8 444 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 WACQ9BTA9 647 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 RPL5P46777 297 aaKnown RBP16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.283e-6■■□□□ 13.6
COL27A1-201ENST00000356083 GALNT10Q86SR1 603 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PREPP48147 710 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF84P51523 738 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF136P52737 540 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 HAGHLQ6PII5 290 aaPredicted RBP16.77■□□□□ 0.27
COL27A1-201ENST00000356083 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 CBR4Q8N4T8 237 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 SHKBP1Q8TBC3 707 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 DUSP26Q9BV47 211 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 TUBG2Q9NRH3 451 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 NUDT4Q9NZJ9 180 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 HOXB9P17482 250 aaPredicted RBP16.77■□□□□ 0.27
COL27A1-201ENST00000356083 POLR2CP19387 275 aaPredicted RBP16.77■□□□□ 0.27
COL27A1-201ENST00000356083 VHLLQ6RSH7 139 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 LRRTM4Q86VH4 590 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 OR13C3Q8NGS6 347 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 MKL1Q969V6 931 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 TLR10Q9BXR5 811 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 SLC22A14Q9Y267 594 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.27
COL27A1-201ENST00000356083 GGT3PA6NGU5 568 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 DUXAA6NLW8 204 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 COQ9O75208 318 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 VSX2P58304 361 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 SLC9B2Q86UD5 537 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 TTLQ8NG68 377 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 OR56B2PQ8NGI1 322 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 OR4D6Q8NGJ1 314 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF347Q96SE7 839 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KCNK6Q9Y257 313 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PTCH2Q9Y6C5 1203 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 NOMO3P69849 1222 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 ADAM15Q13444 863 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 GNMTQ14749 295 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KHDC1LQ5JSQ8 128 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 LRFN4Q6PJG9 635 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 JOSD2Q8TAC2 188 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 ETAA1Q9NY74 926 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PPM1HQ9ULR3 514 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 TBX18O95935 607 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 CHRNB4P30926 498 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 IRF5Q13568 498 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 UGCGQ16739 394 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PLPPR4Q7Z2D5 763 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PEX13Q92968 403 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 S100A16Q96FQ6 103 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PSKH2Q96QS6 385 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 UNC13BO14795 1591 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 SMIM35A0A1B0GVV1 85 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 H7C417 338 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PSPHP78330 225 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KCNC4Q03721 635 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 TXNDC8Q6A555 127 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF773Q6PK81 442 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KCTD7Q96MP8 289 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PITX2Q99697 317 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 C12orf65Q9H3J6 166 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KAT8Q9H7Z6 458 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PRDM15P57071 1507 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 RTCAO00442 366 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF14P17017 642 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 EVX2Q03828 476 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 DMWDQ09019 674 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PPP1R8Q12972 351 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
COL27A1-201ENST00000356083 PAOXQ6QHF9 649 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 KIF18BQ86Y91 864 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 EBF3Q9H4W6 596 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 Q9N2J8 555 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 GBE1Q04446 702 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 MARCH9Q86YJ5 346 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 SLC22A17Q8WUG5 538 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 GCM1Q9NP62 436 aa16.76■□□□□ 0.27
COL27A1-201ENST00000356083 SULT1B1O43704 296 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 LILRB5O75023 590 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 KCNK18Q7Z418 384 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 OR4C15Q8NGM1 316 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 NSMAFQ92636 917 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 HDAC2Q92769 488 aaKnown RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms