RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 ADGRF3Q8IZF5 1079 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 THEM5Q8N1Q8 247 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 AADATQ8N5Z0 425 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 OR2C3Q8N628 320 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZNF548Q8NEK5 533 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 GOT1L1Q8NHS2 421 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 RP9Q8TA86 221 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 NSMCE1Q8WV22 266 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FKBP10Q96AY3 582 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ARRDC3Q96B67 414 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ASB9Q96DX5 294 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MRGPRX1Q96LB2 322 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DACH2Q96NX9 599 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 GPR21Q99679 349 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 BARD1Q99728 777 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 NPAS2Q99743 824 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 P2RY13Q9BPV8 354 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC39A3Q9BRY0 314 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FAM167BQ9BTA0 163 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 KRTAP17-1Q9BYP8 105 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NUF2Q9BZD4 464 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ACPTQ9BZG2 426 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC6A17Q9H1V8 727 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SERHL2Q9H4I8 314 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C11orf49Q9H6J7 331 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FAM30AQ9NZY2 134 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SEPT10Q9P0V9 454 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SERGEFQ9UGK8 458 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PDE10AQ9Y233 779 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SCN3AQ9NY46 2000 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 A0A1W2PQF6 199 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RGSL1A5PLK6 1076 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DPPA5A6NC42 116 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NPEPPSL1A6NEC2 478 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TTC34A8MYJ7 566 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 H0YJX3 145 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TMX2-CTNND1H3BSU7 103 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LINC01565O15544 149 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NARSO43776 548 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 NRP2O60462 931 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ESRRBO95718 433 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ENO1P06733 434 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 GABRB1P18505 474 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 IL1RNP18510 177 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 EN2P19622 333 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 BMPR1AP36894 532 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CASRP41180 1078 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 EMX2Q04743 252 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLC34A1Q06495 639 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DPTQ07507 201 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FUT5Q11128 374 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NFATC3Q12968 1075 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PLD1Q13393 1074 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C16orf72Q14CZ0 275 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ATP6AP1Q15904 470 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DUSP6Q16828 381 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 MGAT5BQ3V5L5 792 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 TTC31Q49AM3 519 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 BCL7AQ4VC05 210 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C4orf46Q504U0 113 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C6orf136Q5SQH8 315 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C10orf120Q5SQS8 335 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PRAMEF14Q5SWL7 426 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 AGBL4Q5VU57 503 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 IL23RQ5VWK5 629 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LPCAT4Q643R3 524 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C22orf39Q6P5X5 142 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DPY19L3Q6ZPD9 716 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LRRC74BQ6ZQY2 392 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PIWIL4Q7Z3Z4 852 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 CCDC91Q7Z6B0 441 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PTAR1Q7Z6K3 402 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 FAM124AQ86V42 546 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RALGPS2Q86X27 583 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 OTUD6BQ8N6M0 293 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 LINC00482Q8N8I6 264 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ANKFN1Q8N957 763 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RASGEF1AQ8N9B8 481 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CCNYQ8ND76 341 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 OR4K1Q8NGD4 311 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RAET1EQ8TD07 263 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SUSD6Q92537 303 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 BADQ92934 168 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NTNG2Q96CW9 530 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RCN3Q96D15 328 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 C19orf60Q96EN9 201 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RIPOR3Q96MK2 946 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 PCDHAC1Q9H158 963 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 OR52A5Q9H2C5 316 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ALG9Q9H6U8 611 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 RPF2Q9H7B2 306 aaKnown RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 DCLRE1BQ9H816 532 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 YY1AP1Q9H869 796 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 FKBP14Q9NWM8 211 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 NSMCE4AQ9NXX6 385 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 SLCO3A1Q9UIG8 710 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 DLGAP4Q9Y2H0 992 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 CRYL1Q9Y2S2 319 aa2.23□□□□□ -2.05
VPS54-202ENST00000354504 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.23□□□□□ -2.05
VPS54-202ENST00000354504 TRIM17Q9Y577 477 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms