RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RBM12BQ8IXT5 1001 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 FBXL6Q8N531 539 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 FAM46DQ8NEK8 389 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 SLC37A2Q8TED4 501 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 ZDHHC1Q8WTX9 485 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 GTF2H4Q92759 462 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 DPH7Q9BTV6 452 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 L3MBTL1Q9Y468 752 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 PCDHA9Q9Y5H5 950 aa20.57■□□□□ 0.88
TSPAN3-202ENST00000346495 PRORSD1PA6NEY8 169 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 SAP18O00422 153 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 NME4O00746 187 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 AKAP10O43572 662 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 FKBP6O75344 327 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CLEC3AO75596 197 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 KRT36O76013 467 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 NXPH1P58417 271 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 ZNF763Q0D2J5 394 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CCNIQ14094 377 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 KIAA1614Q5VZ46 1190 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 GPR180Q86V85 440 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 GKN2Q86XP6 184 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 FAM20CQ8IXL6 584 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CDC26Q8NHZ8 85 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 DNAJB14Q8TBM8 379 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 TMEM125Q96AQ2 219 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 ASB9Q96DX5 294 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 SARGQ9BW04 601 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 SLAMF8Q9P0V8 285 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 MCM8Q9UJA3 840 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 TDRD6O60522 2096 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 VILLO15195 856 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 MAP3K7O43318 606 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 LCMT2O60294 686 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 TCN1P20061 433 aaPredicted RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 HPCAL1P37235 193 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 TRAP1Q12931 704 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 FLOT2Q14254 428 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 TRIM25Q14258 630 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 ZNF425Q6IV72 752 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 AAGABQ6PD74 315 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 WDR48Q8TAF3 677 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 GFM2Q969S9 779 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CGREF1Q99674 301 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CENPKQ9BS16 269 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 CMTM6Q9NX76 183 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 SPASTQ9UBP0 616 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 PCDHGA2Q9Y5H1 932 aa20.56■□□□□ 0.88
TSPAN3-202ENST00000346495 H0Y3Z8 333 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 SCAMP2O15127 329 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 BCAS2O75934 225 aaPredicted RBP20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 PDGFBP01127 241 aaPredicted RBP20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 COX7A2P14406 83 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 AHRP35869 848 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 KIR3DL1P43629 444 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 UGT8Q16880 541 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 HKDC1Q2TB90 917 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 C6orf10Q5SRN2 563 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 NANOGP8Q6NSW7 305 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 KIAA2013Q8IYS2 634 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 AVL9Q8NBF6 648 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 ITCHQ96J02 903 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 PRPF18Q99633 342 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 KCNH6Q9H252 994 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 NANOGQ9H9S0 305 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 ACTR10Q9NZ32 417 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 MAN2B2Q9Y2E5 1009 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 ENTPD2Q9Y5L3 495 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 TRIOO75962 3097 aa20.55■□□□□ 0.88
TSPAN3-202ENST00000346495 OR6C74A6NCV1 312 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 ACOT8O14734 319 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 HAT1O14929 419 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 TBX6O95947 436 aaPredicted RBP20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 KLK1P06870 262 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 HSD17B1P14061 328 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 MSX2P35548 267 aaPredicted RBP20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 BCL6P41182 706 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 EEFSECP57772 596 aaKnown RBP20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 PHC1P78364 1004 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 MS4A2Q01362 244 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 RCN1Q15293 331 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 PAGE2Q7Z2X7 111 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 PLD3Q8IV08 490 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 FAM156AQ8NDB6 213 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 OR8J2Q8NGG1 315 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 FLVCR1-AS1Q8TAF5 88 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 LMX1AQ8TE12 382 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 CREB3L4Q8TEY5 395 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 QRFPRQ96P65 431 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 OR2A14Q96R47 310 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 F2RL3Q96RI0 385 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 MYNNQ9NPC7 610 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 NKX1-2Q9UD57 310 aaPredicted RBP20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 DOLKQ9UPQ8 538 aa20.54■□□□□ 0.88
TSPAN3-202ENST00000346495 B4DGG1 531 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 PLPP1O14494 284 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 BCAT2O15382 392 aaPredicted RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 NDUFS4O43181 175 aa20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 ERN1O75460 977 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-202ENST00000346495 FKBP9O95302 570 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms