RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ATP1A4Q13733 1029 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 CHI3L2Q15782 390 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 LACTB2Q53H82 288 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 MLIPQ5VWP3 458 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 SHISA6Q6ZSJ9 500 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 TRPM8Q7Z2W7 1104 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 ZUFSPQ96AP4 578 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 PYCR2Q96C36 320 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 C7orf26Q96N11 449 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 CATSPER2Q96P56 530 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 SLC25A18Q9H1K4 315 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 MRPS30Q9NP92 439 aaKnown RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 CUTCQ9NTM9 273 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 SNX7Q9UNH6 387 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 POLHQ9Y253 713 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 USH1CQ9Y6N9 552 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 MAU2Q9Y6X3 613 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 NPEPPSL1A6NEC2 478 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 ARGFXA6NJG6 315 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 EIF3FO00303 357 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 ALOX12BO75342 701 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 SAT1P21673 171 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 CRABP2P29373 138 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 RAB10P61026 200 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 RPS15P62841 145 aaKnown RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 BST1Q10588 318 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PCLAFQ15004 111 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 TLDC1Q6P9B6 456 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 AGTRAPQ6RW13 159 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 RAPH1Q70E73 1250 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 VN1R4Q7Z5H5 301 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 C10orf82Q8WW14 230 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 SPSB2Q99619 263 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 TRIM4Q9C037 500 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 YY1AP1Q9H869 796 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 IRAK4Q9NWZ3 460 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 RUVBL1Q9Y265 456 aaKnown RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 MAN2B2Q9Y2E5 1009 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 AP1M2Q9Y6Q5 423 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 A0A1B0GX78 115 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 H7BY64 318 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 SNNO75324 88 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 RECKO95980 971 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 STMN1P16949 149 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 CMPK1P30085 196 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 DCDP81605 110 aaKnown RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 IRF9Q00978 393 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 MC1RQ01726 317 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 OCRLQ01968 901 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PDAP1Q13442 181 aaKnown RBP15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PRSS41Q7RTY9 318 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PPP1R32Q7Z5V6 425 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 CCDC138Q96M89 665 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PRAP1Q96NZ9 151 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 ZFYVE21Q9BQ24 234 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 SGPP1Q9BX95 441 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 PARVBQ9HBI1 364 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 ZNF358Q9NW07 568 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 COPG2Q9UBF2 871 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 MID2Q9UJV3 735 aa15.32■□□□□ 0.04
RAB5C-201ENST00000346213 DSCR3O14972 297 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 FOXS1O43638 330 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 ZBTB14O43829 449 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 ONECUT2O95948 504 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 EIF2S1P05198 315 aaKnown RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 SLC35E2BP0CK96 405 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 ALAS2P22557 587 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 STX3Q13277 289 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 NAE1Q13564 534 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 UGT3A1Q6NUS8 523 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 MRGPREQ86SM8 312 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 MYO1HQ8N1T3 1032 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 PROKR1Q8TCW9 393 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 TSNARE1Q96NA8 513 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 NDC1Q9BTX1 674 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 SLC7A5P2Q9GIP4 190 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 NMRAL1Q9HBL8 299 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 INTS7Q9NVH2 962 aaKnown RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 UTP6Q9NYH9 597 aaKnown RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 CORO1CQ9ULV4 474 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 ACOT9Q9Y305 439 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 PTRH2Q9Y3E5 179 aaKnown RBP15.31■□□□□ 0.04
RAB5C-201ENST00000346213 MED13Q9UHV7 2174 aa15.31■□□□□ 0.04
RAB5C-201ENST00000346213 SEC16AO15027 2179 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 A0A087X1B8 175 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 FEZF1A0PJY2 475 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 PHGDHO43175 533 aaKnown RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 LCMT2O60294 686 aaKnown RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 FKBP9O95302 570 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 CPA3P15088 417 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 BCL6P41182 706 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 CSNK1G2P78368 415 aa15.3■□□□□ 0.04
RAB5C-201ENST00000346213 MEF2AQ02078 507 aaPredicted RBP15.3■□□□□ 0.04
RAB5C-201ENST00000346213 SP140Q13342 867 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms