RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MINDY4Q4G0A6 757 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 CAPN13Q6MZZ7 669 aaPredicted RBP11.76□□□□□ -0.53
SGCA-202ENST00000344627 FAM45BPQ6NSW5 357 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 SIRT6Q8N6T7 355 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 AMER3Q8N944 861 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 FAM45AQ8TCE6 357 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 BRIX1Q8TDN6 353 aaKnown RBP11.76□□□□□ -0.53
SGCA-202ENST00000344627 SLCO2A1Q92959 643 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 PYCR2Q96C36 320 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 THAP11Q96EK4 314 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 MAGEB10Q96LZ2 347 aaPredicted RBP11.76□□□□□ -0.53
SGCA-202ENST00000344627 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 CHST11Q9NPF2 352 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 HCN3Q9P1Z3 774 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 SH2B3Q9UQQ2 575 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 OSGIN2Q9Y236 505 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 PCDHGB6Q9Y5F9 930 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 LOC102723996A0A087X1L8 192 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 SGK494L7N484 410 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 KLHL18O94889 574 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 PRR35P0CG20 571 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 COX6A1P12074 109 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 IL1RNP18510 177 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ELAVL4P26378 380 aaKnown RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 TNFRSF8P28908 595 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 PTGER4P35408 488 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 SOX11P35716 441 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 TNFSF10P50591 281 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 PHKG1Q16816 387 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ZNF324BQ6AW86 544 aaPredicted RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 HIBCHQ6NVY1 386 aaPredicted RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 PRSS41Q7RTY9 318 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ASPGQ86U10 573 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ZC3H7AQ8IWR0 971 aaKnown RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 CNTN4Q8IWV2 1026 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 TBC1D19Q8N5T2 526 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 CATSPER1Q8NEC5 780 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 OR1N1Q8NGS0 311 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 SLC13A3Q8WWT9 602 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 NR4A3Q92570 626 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 SNF8Q96H20 258 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 TUBB6Q9BUF5 446 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.75□□□□□ -0.53
SGCA-202ENST00000344627 PLA2G3Q9NZ20 509 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ZFATQ9P243 1243 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 ABI3Q9P2A4 366 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 C19orf25Q9UFG5 118 aaPredicted RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 CORO1CQ9ULV4 474 aaPredicted RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 DIDO1Q9BTC0 2240 aaKnown RBP11.75□□□□□ -0.53
SGCA-202ENST00000344627 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
SGCA-202ENST00000344627 KCNE1BA0A087WTH5 132 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 IGHV1-45A0A0A0MS14 117 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 H0YIG0 161 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 OR1F1O43749 312 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 LCMT2O60294 686 aaKnown RBP11.74□□□□□ -0.53
SGCA-202ENST00000344627 SEC24DO94855 1032 aaPredicted RBP11.74□□□□□ -0.53
SGCA-202ENST00000344627 F10P00742 488 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 CELA2AP08217 269 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 SLC35G6P0C7Q6 338 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 C8orf89P0DMQ9 161 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 NPPBP16860 134 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 AGAP20933 346 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 BCL6P41182 706 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 CCR8P51685 355 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 CASP6P55212 293 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
SGCA-202ENST00000344627 MEF2AQ02078 507 aaPredicted RBP11.74□□□□□ -0.53
SGCA-202ENST00000344627 DUPD1Q68J44 220 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 CAPN12Q6ZSI9 719 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 VN1R4Q7Z5H5 301 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 STRA8Q7Z7C7 330 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 GALNT7Q86SF2 657 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 SLC26A11Q86WA9 606 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 KCT2Q8NC54 265 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 OR51Q1Q8NH59 317 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 ATL1Q8WXF7 558 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 KRT12Q99456 494 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 OLFM1Q99784 485 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 SGPP1Q9BX95 441 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 ZNF700Q9H0M5 742 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 COPG2Q9UBF2 871 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 SNX24Q9Y343 169 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 TEX264Q9Y6I9 313 aa11.74□□□□□ -0.53
SGCA-202ENST00000344627 IGHV3-20A0A0C4DH32 117 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 A8MUI8 341 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 CCDC188H7C350 402 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 NDUFS4O43181 175 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 RDH16O75452 317 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 SEC31AO94979 1220 aaKnown RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 RASAL1O95294 804 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 NSA2O95478 260 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms