RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MAT1AQ00266 395 aaKnown RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 PWP1Q13610 501 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 HERC3Q15034 1050 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 TGFBIQ15582 683 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 ZKSCAN8Q15776 578 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 CATSPEREQ5SY80 951 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 JMJD6Q6NYC1 403 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 RAPH1Q70E73 1250 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 TMPRSS11BQ86T26 416 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 CTAGE6Q86UF2 777 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 GPSM1Q86YR5 675 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 ZC3H7AQ8IWR0 971 aaKnown RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 CTAGE4Q8IX94 777 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 MMGT1Q8N4V1 131 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 PNPLA2Q96AD5 504 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 MFRPQ9BY79 579 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 UNKQ9C0B0 810 aaKnown RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 LHPPQ9H008 270 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 ZNF552Q9H707 407 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 CNOT10Q9H9A5 744 aaKnown RBP15.24■□□□□ 0.03
ATG4B-201ENST00000344376 WWOXQ9NZC7 414 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 SLC22A7Q9Y694 548 aa15.24■□□□□ 0.03
ATG4B-201ENST00000344376 NSG1A0A0A6YYJ2 146 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NCF1BA6NI72 391 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NCF1CA8MVU1 366 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ALOX12BO75342 701 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 WDR47O94967 919 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 C1QAP02745 245 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 S100BP04271 92 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NCF1P14598 390 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-201ENST00000344376 GNAZP19086 355 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 REEP5Q00765 189 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 SYT16Q17RD7 645 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 CDKL4Q5MAI5 379 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 MFSD4BQ5TF39 518 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 AGAP7PQ5VUJ5 663 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ATG9BQ674R7 924 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 SLC6A19Q695T7 634 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NIPAL1Q6NVV3 410 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NXPE4Q6UWF7 544 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 IGFL3Q6UXB1 125 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 NDUFAF7Q7L592 441 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 LAPTM4BQ86VI4 370 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 PARP9Q8IXQ6 854 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 SPATA6LQ8N4H0 392 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ZADH2Q8N4Q0 377 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 KCT2Q8NC54 265 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 METTL21AQ8WXB1 218 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 C8orf44Q96CB5 159 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 RHBDF1Q96CC6 855 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 AGAP4Q96P64 663 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 CAPS2Q9BXY5 557 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ZNF160Q9HCG1 818 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ZDHHC18Q9NUE0 388 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 HCN3Q9P1Z3 774 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 MKL2Q9ULH7 1088 aa15.23■□□□□ 0.03
ATG4B-201ENST00000344376 TENM4Q6N022 2769 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 URADA6NGE7 173 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 SGK494L7N484 410 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 H2AFYO75367 372 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 SORBS2O94875 1100 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 KLHL18O94889 574 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 BMP10O95393 424 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 ZIC2O95409 532 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 CYC1P08574 325 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 CD1DP15813 335 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 VARSP26640 1264 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 CRABP2P29373 138 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 AHRP35869 848 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 XCR1P46094 333 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 SCTRP47872 440 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 EEF1A2Q05639 463 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 IGFBP7Q16270 282 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 FAAH2Q6GMR7 532 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 ABHD13Q7L211 337 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 PRSS41Q7RTY9 318 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 TBC1D1Q86TI0 1168 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 KBTBD2Q8IY47 623 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 RBMXL3Q8N7X1 1067 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 OR51Q1Q8NH59 317 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 CPT1CQ8TCG5 803 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 THOC3Q96J01 351 aaKnown RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 RIC8BQ9NVN3 520 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 C19orf25Q9UFG5 118 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-201ENST00000344376 NAALAD2Q9Y3Q0 740 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 MED13Q9UHV7 2174 aa15.22■□□□□ 0.03
ATG4B-201ENST00000344376 RDH16O75452 317 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 FAM155BO75949 473 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 C8orf89P0DMQ9 161 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 COX6A1P12074 109 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 SLC6A12P48065 614 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 AP2B1P63010 937 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 CDC16Q13042 620 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 EFTUD2Q15029 972 aaKnown RBP eCLIP15.21■□□□□ 0.033e-7■■□□□ 13.1
ATG4B-201ENST00000344376 RBBP5Q15291 538 aaKnown RBP15.21■□□□□ 0.03
ATG4B-201ENST00000344376 MINDY4Q4G0A6 757 aa15.21■□□□□ 0.03
ATG4B-201ENST00000344376 GLE1Q53GS7 698 aaKnown RBP15.21■□□□□ 0.03
ATG4B-201ENST00000344376 SULT1C3Q6IMI6 304 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms