RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TRAF3IP2O43734 574 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 BMP6P22004 513 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CHI3L1P36222 383 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 HSPA7P48741 367 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PIGPP57054 158 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LSM3P62310 102 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 AMZ1Q400G9 498 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LARP4Q71RC2 724 aaKnown RBP eCLIP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FAM131BQ86XD5 332 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 HS6ST3Q8IZP7 471 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LMNTD1Q8N9Z9 388 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR7D4Q8NG98 312 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR56A4Q8NGH8 313 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LCN9Q8WX39 176 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ACSF2Q96CM8 615 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SMARCD1Q96GM5 515 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF518BQ9C0D4 1074 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RBFOX1Q9NWB1 397 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR6C2Q9NZP2 312 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MAP3K2Q9Y2U5 619 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 hCG_2039718K7EN88 272 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MATN3O15232 486 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 BUD23O43709 281 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GUCY1A2P33402 732 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 KLF10Q13118 480 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PROX2Q3B8N5 592 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TSTD2Q5T7W7 516 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR2W6PQ8NHA6 318 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MEIS3Q99687 375 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ERI2A8K979 691 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TNFRSF11BO00300 401 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DHRS4L1P0CG22 281 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MASP1P48740 699 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TOB2Q14106 344 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF613Q6PF04 617 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CADM2Q8N3J6 435 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 C2orf88Q9BSF0 95 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SPNS1Q9H2V7 528 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SMPD4Q9NXE4 827 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CACNA1BQ00975 2339 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 H3BMQ9 156 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CASKO14936 926 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CREBL2O60519 120 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CRYZQ08257 329 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC9A3R2Q15599 337 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GRIK5Q16478 980 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RALGPS1Q5JS13 557 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DCST2Q5T1A1 773 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 AWAT2Q6E213 333 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OVCH2Q7RTZ1 564 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 KLHL36Q8N4N3 616 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR52N2Q8NGI0 321 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TBC1D20Q96BZ9 403 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NOL4LQ96MY1 436 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PCIF1Q9H4Z3 704 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 B4GAT1O43505 415 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TAGLN2P37802 199 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CASRP41180 1078 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CTSWP56202 376 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CYP2A13Q16696 494 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ANKRD54Q6NXT1 300 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC16A9Q7RTY1 509 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 C12orf40Q86WS4 652 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TOMM5Q8N4H5 51 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC35G2Q8TBE7 412 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SIGLEC10Q96LC7 697 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FERD3LQ96RJ6 166 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF559Q9BR84 538 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC4Q9HBW1 653 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CACFD1Q9UGQ2 172 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLCO1B1Q9Y6L6 691 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 A0A087WZY1 265 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DCAF8L1A6NGE4 600 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 BRINP1O60477 761 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC43A1O75387 559 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LRATO95237 230 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CD19P15391 556 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CNKSR3Q6P9H4 555 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NSMFQ6X4W1 530 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SCRN2Q96FV2 425 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR5M11Q96RB7 305 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR2AG1Q9H205 316 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PURGQ9UJV8 347 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC6A5Q9Y345 797 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TCHHQ07283 1943 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ABCC3O15438 1527 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PRRG1O14668 218 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RNH1P13489 461 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CSNK1EP49674 416 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 EEFSECP57772 596 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GPAT3Q53EU6 434 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 VITQ6UXI7 678 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CHRDL2Q6WN34 429 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FBXL18Q96ME1 805 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM7Q9H2U9 754 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OLAHQ9NV23 265 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DISP1Q96F81 1524 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 A0A087X1B8 175 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PPP1R3GB7ZBB8 358 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms