RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PRRT4C9JH25 899 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 CD9P21926 228 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
LIN54-201ENST00000340417 CTBP2P56545 445 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 ARMC3Q5W041 872 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 ADCK1Q86TW2 530 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SLC5A8Q8N695 610 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 BHLHE22Q8NFJ8 381 aaPredicted RBP12.37□□□□□ -0.43
LIN54-201ENST00000340417 OR2L2Q8NH16 312 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 MRGPRX1Q96LB2 322 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 PPP4R1LQ9P1A2 415 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 MARCH4Q9P2E8 410 aaPredicted RBP12.37□□□□□ -0.43
LIN54-201ENST00000340417 TEX264Q9Y6I9 313 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 MYL12BO14950 172 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SCRG1O75711 98 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 FECHP22830 423 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 IGFBP6P24592 240 aaPredicted RBP12.37□□□□□ -0.43
LIN54-201ENST00000340417 MPLP40238 635 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 SERPINB10P48595 397 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 ZNF781Q8N8C0 355 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 RACGAP1Q9H0H5 632 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
LIN54-201ENST00000340417 DLL1O00548 723 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 IFNW1P05000 195 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ZNF765Q7L2R6 523 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 OR6C1Q96RD1 312 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 PKP4Q99569 1192 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SLC35A5Q9BS91 424 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 MKKSQ9NPJ1 570 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 P2RX2Q9UBL9 471 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TMED5Q9Y3A6 229 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ALOX12P18054 663 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ARSDP51689 593 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TRMT5Q32P41 509 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 TICAM1Q8IUC6 712 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 SETD9Q8NE22 299 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 POP5Q969H6 163 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 GDF15Q99988 308 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 HOPXQ9BPY8 73 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 GRXCR2A6NFK2 248 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 C10orf62Q5T681 223 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 ALYREFQ86V81 257 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 MOSPD2Q8NHP6 518 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 KLHL1Q9NR64 748 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SH3BGRL2Q9UJC5 107 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 DLGAP4Q9Y2H0 992 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 CBX6O95503 412 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SHC2P98077 582 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SHISA6Q6ZSJ9 500 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ARHGAP12Q8IWW6 846 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TBC1D10AQ9BXI6 508 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 ADAMTSL1Q8N6G6 1762 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TOR1BO14657 336 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 CST1P01037 141 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 BMP8BP34820 402 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SLC7A2P52569 658 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 OLR1P78380 273 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 FOXK1P85037 733 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 CYP27C1Q4G0S4 372 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TTMPQ5BVD1 217 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 NKAIN2Q5VXU1 208 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 TDRPQ86YL5 185 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 GRHL3Q8TE85 626 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SH3YL1Q96HL8 342 aaPredicted RBP12.36□□□□□ -0.43
LIN54-201ENST00000340417 SIGLEC10Q96LC7 697 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SLCO1B3Q9NPD5 702 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 THSD1Q9NS62 852 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 KCND3Q9UK17 655 aa12.36□□□□□ -0.43
LIN54-201ENST00000340417 SCO2O43819 266 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 C1SP09871 688 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 ERVK-8P63133 956 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TMEM35AQ53FP2 167 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 GIN1Q9NXP7 522 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 MARK1Q9P0L2 795 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 MAGEL2Q9UJ55 1249 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 C4orf47A7E2U8 309 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TRIM38O00635 465 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 STX16O14662 325 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TBX10O75333 385 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 SMNDC1O75940 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
LIN54-201ENST00000340417 SLC25A3Q00325 362 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TLDC1Q6P9B6 456 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 DIO2Q92813 273 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 FCRL3Q96P31 734 aaPredicted RBP12.35□□□□□ -0.43
LIN54-201ENST00000340417 TIGARQ9NQ88 270 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 EGFL7Q9UHF1 273 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms