RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 GLYR1Q49A26 553 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 IL31Q6EBC2 164 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 GHDCQ8N2G8 530 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 TRMOQ9BU70 441 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 MND1Q9BWT6 205 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PIGUQ9H490 435 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ABCC13Q9NSE7 274 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PPP1R14DQ9NXH3 145 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PURGQ9UJV8 347 aaKnown RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ATXN7L1Q9ULK2 861 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PTGDR2Q9Y5Y4 395 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 A0A0G2JPF8 293 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 CHP2O43745 196 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 PAGE1O75459 146 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 RLN2P04090 185 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 ITGB1P05556 798 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 ITGB8P26012 769 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 DCTP40126 519 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 RAB10P61026 200 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 SERTAD2Q14140 314 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 MAD2L1BPQ15013 274 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-201ENST00000328923 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 PAGE3Q5JUK9 113 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 KCTD11Q693B1 232 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 FRMPD2BQ6IN97 320 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 RBMS3Q6XE24 437 aaKnown RBP11.46□□□□□ -0.57
SHMT2-201ENST00000328923 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 GPR142Q7Z601 462 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 CUZD1Q86UP6 607 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 CNTN4Q8IWV2 1026 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
SHMT2-201ENST00000328923 SVOPLQ8N434 492 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 POF1BQ8WVV4 589 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 FCGR1BQ92637 280 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 NT5C1AQ9BXI3 368 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 SLC29A3Q9BZD2 475 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 R3HDMLQ9H3Y0 253 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF222Q9UK12 451 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.57
SHMT2-201ENST00000328923 TRIP11Q15643 1979 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 A0A087X1B8 175 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 ASPDHA6ND91 283 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 VPS26AO75436 327 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 OAZ2O95190 189 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CD63P08962 238 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 HAPLN1P10915 354 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 GOT1P17174 413 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 TPH1P17752 444 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 TSPAN8P19075 237 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 EFNA1P20827 205 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 HTR1EP28566 365 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 EPHA2P29317 976 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 KCNJ3P48549 501 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 RGS6P49758 472 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CLCN5P51795 746 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 TKTL1P51854 596 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CLDN20P56880 219 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CYP4F8P98187 520 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CRYZQ08257 329 aaKnown RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 FGL1Q08830 312 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CAMK1Q14012 370 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 PAFAH1B3Q15102 231 aaKnown RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 PYDC2Q56P42 97 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 NADSYN1Q6IA69 706 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CAPN13Q6MZZ7 669 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CEP68Q76N32 757 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CDYL2Q8N8U2 506 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF675Q8TD23 568 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 C2CD4CQ8TF44 421 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 ADAMTS14Q8WXS8 1223 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 GTF3AQ92664 365 aaKnown RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 DNASE1L2Q92874 299 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 RAB7BQ96AH8 199 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 MYOCQ99972 504 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 PTDSS2Q9BVG9 487 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 CD244Q9BZW8 370 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.58
SHMT2-201ENST00000328923 TXNRD2Q9NNW7 524 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 NRBP2Q9NSY0 501 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.58
SHMT2-201ENST00000328923 LOC102723532A0A0G2JNH3 316 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 FAM240BA0A1B0GVZ2 78 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 DBX1A6NMT0 343 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 WBP4O75554 376 aaKnown RBP11.45□□□□□ -0.58
SHMT2-201ENST00000328923 TGM6O95932 706 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 PAMP19021 973 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 IGFBP5P24593 272 aa11.45□□□□□ -0.58
SHMT2-201ENST00000328923 RPS19P39019 145 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms