RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 LANCL3Q6ZV70 420 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 AMER2Q8N7J2 671 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 MFSD9Q8NBP5 474 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 FBXO36Q8NEA4 188 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 OR1N1Q8NGS0 311 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 OR51Q1Q8NH59 317 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 GRHL3Q8TE85 626 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 ATL1Q8WXF7 558 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 MAGEB10Q96LZ2 347 aaPredicted RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 RBCK1Q9BYM8 510 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 ZNF700Q9H0M5 742 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 PLA2G3Q9NZ20 509 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 PLEKHB1Q9UF11 243 aaPredicted RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 PSAT1Q9Y617 370 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 USP9YO00507 2555 aaPredicted RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 SPTBN1Q01082 2364 aaKnown RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 MAST4O15021 2626 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 IGHV3-20A0A0C4DH32 117 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 A0A1W2PQ72 361 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 ZNF860A6NHJ4 632 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 NDUFS4O43181 175 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 SERPIND1P05546 499 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 ITGAMP11215 1152 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 SOX11P35716 441 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 MGAT5Q09328 741 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 ZXDCQ2QGD7 858 aaPredicted RBP18.46■□□□□ 0.55
LIME1-201ENST00000309546 FAM180AQ6UWF9 173 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 CAPN12Q6ZSI9 719 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 STRA8Q7Z7C7 330 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 OR56A3Q8NH54 315 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 PSMF1Q92530 271 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 FBXL8Q96CD0 374 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 TM4SF19Q96DZ7 209 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 KRT12Q99456 494 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 ERRFI1Q9UJM3 462 aaPredicted RBP18.46■□□□□ 0.55
LIME1-201ENST00000309546 IKZF3Q9UKT9 509 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 SNX24Q9Y343 169 aa18.46■□□□□ 0.55
LIME1-201ENST00000309546 SPTAN1Q13813 2472 aaKnown RBP18.46■□□□□ 0.55
LIME1-201ENST00000309546 SCN2AQ99250 2005 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 FAM95CA0A1B0GW59 222 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 NPEPPSL1A6NEC2 478 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 OR1F1O43749 312 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 SEC24DO94855 1032 aaPredicted RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 ENO2P09104 434 aaPredicted RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 ZNF37AP17032 561 aaPredicted RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 RPL21P46778 160 aaKnown RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 MRPS25P82663 173 aaKnown RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 ZNF460Q14592 562 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 CATSPEREQ5SY80 951 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 TMEM207Q6UWW9 146 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 RIPOR1Q6ZS17 1223 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 PDSS2Q86YH6 399 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 ST6GALNAC3Q8NDV1 305 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 ABHD11Q8NFV4 315 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 SLC5A11Q8WWX8 675 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 TSNARE1Q96NA8 513 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 OR4K3Q96R72 315 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 BARD1Q99728 777 aaKnown RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 TUBB6Q9BUF5 446 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 FAM129AQ9BZQ8 928 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 C19orf25Q9UFG5 118 aaPredicted RBP18.45■□□□□ 0.54
LIME1-201ENST00000309546 NAALAD2Q9Y3Q0 740 aa18.45■□□□□ 0.54
LIME1-201ENST00000309546 NAV2Q8IVL1 2488 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 OR2W5A6NFC9 320 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 CDC123O75794 336 aaPredicted RBP18.44■□□□□ 0.54
LIME1-201ENST00000309546 AP2B1P63010 937 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 FRG1Q14331 258 aaKnown RBP18.44■□□□□ 0.54
LIME1-201ENST00000309546 CSHL1Q14406 222 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 SBSNQ6UWP8 590 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 CPEB2Q7Z5Q1 589 aaKnown RBP18.44■□□□□ 0.54
LIME1-201ENST00000309546 ZC3HC1Q86WB0 502 aaKnown RBP18.44■□□□□ 0.54
LIME1-201ENST00000309546 ZBED8Q8IZ13 594 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 TBC1D19Q8N5T2 526 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 MOCOSQ96EN8 888 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 PEX11GQ96HA9 241 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 C5orf34Q96MH7 638 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 CYTH2Q99418 400 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 EGFL8Q99944 293 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.545e-9■■■■□ 24.5
LIME1-201ENST00000309546 SLC5A6Q9Y289 635 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 DYRK1BQ9Y463 629 aa18.44■□□□□ 0.54
LIME1-201ENST00000309546 SVILO95425 2214 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 TRBC2A0A5B9 178 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 CDC7O00311 574 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 E2F3O00716 465 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 TP73O15350 636 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 DDAH2O95865 285 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 ICAM2P13598 275 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 TNFSF10P50591 281 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 ZNF33BQ06732 778 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 BTBD16Q32M84 506 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 C4orf17Q53FE4 359 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 TMPRSS11BQ86T26 416 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 NKAPQ8N5F7 415 aaKnown RBP18.43■□□□□ 0.54
LIME1-201ENST00000309546 ZNF740Q8NDX6 193 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 OR5T3Q8NGG3 340 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 FAR1Q8WVX9 515 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 NEIL2Q969S2 332 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 IMMP1LQ96LU5 166 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 DPH5Q9H2P9 285 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms