RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ARPC2O15144 300 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PRICKLE3O43900 615 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 DFNA5O60443 496 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 IGHV4-34P06331 123 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ANXA4P09525 319 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 ATP6V1B2P21281 511 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ATP6V1C1P21283 382 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 CD72P21854 359 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PTPN6P29350 595 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 GSTM5P46439 218 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ERFP50548 548 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 STARD6P59095 220 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PHC1P78364 1004 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 CYP4F3Q08477 520 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 NUMA1Q14980 2115 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 TAF11Q15544 211 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 UGT8Q16880 541 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 DUOXA1Q1HG43 343 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 OGFRL1Q5TC84 451 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 ANXA8L1Q5VT79 327 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ICE2Q659A1 982 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 Q6ZS52 159 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 IKBIPQ70UQ0 350 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 VN1R5Q7Z5H4 357 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 MSRB3Q8IXL7 192 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PGBD3Q8N328 593 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ADCY4Q8NFM4 1077 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 TTLQ8NG68 377 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 OR52E4Q8NGH9 312 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 OR52E1Q8NGJ3 308 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM3-202ENST00000302206 MTERF3Q96E29 417 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PDXPQ96GD0 296 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PRPF18Q99633 342 aaKnown RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 KLHL4Q9C0H6 718 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 TWSG1Q9GZX9 223 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PCED1AQ9H1Q7 454 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 SPNS1Q9H2V7 528 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 MYNNQ9NPC7 610 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 PRDM8Q9NQV8 689 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 GPR27Q9NS67 375 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 CCM2LQ9NUG4 571 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 WSB2Q9NYS7 404 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 WNT16Q9UBV4 365 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 BTNL2Q9UIR0 455 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 MCM8Q9UJA3 840 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 RIMS3Q9UJD0 308 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ICKQ9UPZ9 632 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.52□□□□□ -0.57
TPM3-202ENST00000302206 GMEB1Q9Y692 573 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 TRBC2A0A5B9 178 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 A6NCN8 305 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ANKDD1BA6NHY2 528 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 PCDH7O60245 1069 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 SCN2BO60939 215 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 TNFP01375 233 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 COX7A2P14406 83 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 CD6P30203 668 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 SHMT2P34897 504 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ARFIP1P53367 373 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 WNT3P56703 355 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 YBX1P67809 324 aaKnown RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ZNF763Q0D2J5 394 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 PGS1Q32NB8 556 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 TPRG1LQ5T0D9 272 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 DEPDC1Q5TB30 811 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ADNP2Q6IQ32 1131 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 Q6ZSR6 202 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 COMMD6Q7Z4G1 85 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 R3HCC1LQ7Z5L2 792 aaKnown RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 LMNTD1Q8N9Z9 388 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 FLCNQ8NFG4 579 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 TSTD1Q8NFU3 115 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 OR2A1Q8NGT9 310 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 NUDT8Q8WV74 236 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 SLCO4A1Q96BD0 722 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 TOE1Q96GM8 510 aaKnown RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 EGLN2Q96KS0 407 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 QRFPRQ96P65 431 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 ECSITQ9BQ95 431 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 CPPED1Q9BRF8 314 aaPredicted RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 SARGQ9BW04 601 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 EBPLQ9BY08 206 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 MS4A8Q9BY19 250 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 BHLHE41Q9C0J9 482 aaPredicted RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 REEP4Q9H6H4 257 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 C6orf106Q9H6K1 298 aaPredicted RBP11.51□□□□□ -0.57
TPM3-202ENST00000302206 LTB4R2Q9NPC1 389 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 TMEM184CQ9NVA4 438 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 SLC25A37Q9NYZ2 338 aa11.51□□□□□ -0.57
TPM3-202ENST00000302206 OR6C2Q9NZP2 312 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms