RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 UAP1Q16222 522 aaPredicted RBP9.28□□□□□ -0.92
CCDC58-201ENST00000291458 NDUFA9Q16795 377 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ZXDCQ2QGD7 858 aaPredicted RBP9.28□□□□□ -0.92
CCDC58-201ENST00000291458 MINDY4Q4G0A6 757 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 IRAK1BP1Q5VVH5 260 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 SLC6A19Q695T7 634 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 PRMT9Q6P2P2 845 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 KIRREL2Q6UWL6 708 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 SBSNQ6UWP8 590 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ZDHHC24Q6UX98 284 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ASPGQ86U10 573 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 SLC26A11Q86WA9 606 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ZC3H7AQ8IWR0 971 aaKnown RBP9.28□□□□□ -0.92
CCDC58-201ENST00000291458 AMER3Q8N944 861 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 KCT2Q8NC54 265 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF740Q8NDX6 193 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 CDKL2Q92772 493 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 FBXL8Q96CD0 374 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 MOCOSQ96EN8 888 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 MAGEB10Q96LZ2 347 aaPredicted RBP9.28□□□□□ -0.92
CCDC58-201ENST00000291458 IP6K3Q96PC2 410 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 OR4K3Q96R72 315 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 SGPP1Q9BX95 441 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 WDR54Q9H977 334 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 ZNF160Q9HCG1 818 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 SLAMF7Q9NQ25 335 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 TMEM184CQ9NVA4 438 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 NSMCE4AQ9NXX6 385 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 WWOXQ9NZC7 414 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 CTNNAL1Q9UBT7 734 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
CCDC58-201ENST00000291458 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 OR2W5A6NFC9 320 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 LCMT2O60294 686 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CEACAM4O75871 244 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 F10P00742 488 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 ALBP02768 609 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 ALPPP05187 535 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 HEXBP07686 556 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CCND1P24385 295 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 GRK3P35626 688 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 GDF5P43026 501 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 AVPR1BP47901 424 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CCR8P51685 355 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 EMP2P54851 167 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 AP1S2P56377 157 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 GUCY2DQ02846 1103 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 BMPR2Q13873 1038 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 FRG1Q14331 258 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CSHL1Q14406 222 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 MYBPC3Q14896 1274 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 KBTBD12Q3ZCT8 623 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 UBAP2Q5T6F2 1119 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 JMJD6Q6NYC1 403 aaPredicted RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 LINC00696Q6ZRV3 163 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 C3orf62Q6ZUJ4 267 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 LANCL3Q6ZV70 420 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CMC1Q7Z7K0 106 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 THOC6Q86W42 341 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 NKAPQ8N5F7 415 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 RBMXL3Q8N7X1 1067 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 SNX31Q8N9S9 440 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 OR11G2Q8NGC1 345 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 OR5T3Q8NGG3 340 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CPT1CQ8TCG5 803 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 FBF1Q8TES7 1133 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 SLC5A11Q8WWX8 675 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CCT6BQ92526 530 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 NEIL2Q969S2 332 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 THOC3Q96J01 351 aaKnown RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 RBBP8Q99708 897 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CPNE1Q99829 537 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 HAUS8Q9BT25 410 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 LRRC1Q9BTT6 524 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 ILKAPQ9H0C8 392 aaPredicted RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 PCBD2Q9H0N5 130 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 SLC26A1Q9H2B4 701 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 ZBTB20Q9HC78 741 aaPredicted RBP9.27□□□□□ -0.93
CCDC58-201ENST00000291458 SEMA3GQ9NS98 782 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 MOCS1Q9NZB8 636 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 MKL2Q9ULH7 1088 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CDC14AQ9UNH5 594 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CSAG2Q9Y5P2 127 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 CFAP46Q8IYW2 2715 aa9.27□□□□□ -0.93
CCDC58-201ENST00000291458 NSG1A0A0A6YYJ2 146 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 A0A0G2JN53 185 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 FAM159BA6NKW6 160 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 VSTM2BA6NLU5 285 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SUPT3HB4E1H0 165 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 TXNDC9O14530 226 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 CLGNO14967 610 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 EIF3HO15372 352 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SUPT3HO75486 399 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 KLHL18O94889 574 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 IGHEP01854 428 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
CCDC58-201ENST00000291458 SLC35G6P0C7Q6 338 aa9.26□□□□□ -0.93
CCDC58-201ENST00000291458 ZNF888P0CJ79 500 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms