RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GPR18Q14330 331 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CACHD1Q5VU97 1274 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 PIGWQ7Z7B1 504 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ADGRF3Q8IZF5 1079 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ARL14Q8N4G2 192 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 LMNTD1Q8N9Z9 388 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ABHD11Q8NFV4 315 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CD180Q99467 661 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ROGDIQ9GZN7 287 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 ADNPQ9H2P0 1102 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 SRMSQ9H3Y6 488 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 IPPKQ9H8X2 491 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 FAF1Q9UNN5 650 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 CHD8Q9HCK8 2581 aa8.11□□□□□ -1.11
PTPDC1-201ENST00000288976 A8MUI8 341 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 C2orf74A8MZ97 194 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TNFSF14O43557 240 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 HS6ST1O60243 411 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 HSD3B1P14060 373 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ACPPP15309 386 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 GLB1P16278 677 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 HSD3B2P26439 372 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ARRB2P32121 409 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 GPLD1P80108 840 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 REEP5Q00765 189 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF542PQ5EBM4 170 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 DUS1LQ6P1R4 473 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SCIMPQ6UWF3 145 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 LINC01555Q8NAE3 123 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 FLVCR1-AS1Q8TAF5 88 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 METTL21AQ8WXB1 218 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 GFM2Q969S9 779 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 THAP11Q96EK4 314 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 METTL2AQ96IZ6 378 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 KLHL25Q9H0H3 589 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ARRDC1-AS1Q9H2J1 176 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 NOL11Q9H8H0 719 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ZBTB26Q9HCK0 441 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ANGPT4Q9Y264 503 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 H0YIV9 168 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 UBFD1O14562 309 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 AZIN1O14977 448 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF682O95780 498 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 JMJD7P0C870 316 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TFPIP10646 304 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 NPPBP16860 134 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ENGP17813 658 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CAPZBP47756 277 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 KCNJ5P48544 419 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ARFIP1P53367 373 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TBL3Q12788 808 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 NAE1Q13564 534 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 C18orf21Q32NC0 220 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SYVN1Q86TM6 617 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 OR4K1Q8NGD4 311 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CEP70Q8NHQ1 597 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ERP27Q96DN0 273 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 MID1IP1Q9NPA3 183 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TMEM184CQ9NVA4 438 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 INTS7Q9NVH2 962 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 AHSPQ9NZD4 102 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 PSME2Q9UL46 239 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ERVK-11Q9UQG0 969 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ASB1Q9Y576 335 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 KRT6AP02538 564 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 KRT6BP04259 564 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TSPAN8P19075 237 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CMPK1P30085 196 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 KRT6CP48668 564 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 MRPL19P49406 292 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 HYAL2Q12891 473 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SPIDRQ14159 915 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CSRP2Q16527 193 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ATAD3BQ5T9A4 648 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ICE2Q659A1 982 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CGB2Q6NT52 195 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 LAS2Q8IYD9 372 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 TTLQ8NG68 377 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 MAELQ96JY0 434 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 OR4K3Q96R72 315 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 CCDC28BQ9BUN5 200 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 C20orf27Q9GZN8 174 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 BRF2Q9HAW0 419 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SEMA4BQ9NPR2 832 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 UCKL1Q9NWZ5 548 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SEMA5BQ9P283 1151 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 EPHA6Q9UF33 1036 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 ENTPD4Q9Y227 616 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 PTPRQQ9UMZ3 2332 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 OR5K3A6NET4 321 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 FLRT2O43155 660 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 LYPLA1O75608 230 aaPredicted RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 WFS1O76024 890 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 PEBP1P30086 187 aaKnown RBP8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SEPHS1P49903 392 aa8.1□□□□□ -1.11
PTPDC1-201ENST00000288976 SH3BP2P78314 561 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms