RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 IL17CQ9P0M4 197 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 TRIOO75962 3097 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 LOC730098B7Z3J9 87 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 MYO1DO94832 1006 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ADH1CP00326 375 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 EBLN1P0CF75 366 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 HLA-EP13747 358 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 SERPINB1P30740 379 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 KRT20P35900 424 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 TGFBR1P36897 503 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 FADDQ13158 208 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 KCNJ8Q15842 424 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 GAB4Q2WGN9 574 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 FAAH2Q6GMR7 532 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ARMC8Q8IUR7 673 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 TDHQ8IZJ6 230 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 MCFD2Q8NI22 146 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 PSMA8Q8TAA3 256 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 USP7Q93009 1102 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 SUV39H2Q9H5I1 410 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 DZANK1Q9NVP4 752 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 DLGAP4Q9Y2H0 992 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 OR2A25A4D2G3 310 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CCNDBP1O95273 360 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CD36P16671 472 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 FPR1P21462 350 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 PTPN6P29350 595 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CDKN2CP42773 168 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ZHX1-C8orf76Q96EF9 292 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 NTMT1Q9BV86 223 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ZFYVE1Q9HBF4 777 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 PARVBQ9HBI1 364 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 THG1LQ9NWX6 298 aaKnown RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CLEC1BQ9P126 229 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 PNMA8BQ9ULN7 279 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 B3GALT4O96024 378 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ZNF7P17097 686 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 DNAJA1P31689 397 aaKnown RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 TPTEP56180 551 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CLDN8P56748 225 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CDC20Q12834 499 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 SELENBP1Q13228 472 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CERS6Q6ZMG9 384 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 ZNF551Q7Z340 670 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 EFHD2Q96C19 240 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-201ENST00000250448 PYCR2Q96C36 320 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 FAM83CQ9BQN1 747 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 SLC29A3Q9BZD2 475 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 IL1RAPQ9NPH3 570 aa16.4■□□□□ 0.22
FOXA1-201ENST00000250448 CLDN24A6NM45 220 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 EFCAB9A8MZ26 197 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 WASH3PC4AMC7 463 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 LCKP06239 509 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 RPS3P23396 243 aaKnown RBP eCLIP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 CSNK1DP48730 415 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 ARSIQ5FYB1 569 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 SERPINA9Q86WD7 417 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 FGF14Q92915 247 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 MTFMTQ96DP5 389 aaKnown RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 CDCA3Q99618 268 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 MYOCQ99972 504 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 BOCQ9BWV1 1114 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 ACPTQ9BZG2 426 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 EPS8L2Q9H6S3 715 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 SP140LQ9H930 580 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 PDP1Q9P0J1 537 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 KIF17Q9P2E2 1029 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 hCG_2039718K7EN88 272 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 LEFTY1O75610 366 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 DIRAS1O95057 198 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 OXSR1O95747 527 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 EPB42P16452 691 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 DGKAP23743 735 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 HMGCLP35914 325 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 METAP1P53582 386 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 PARM1Q6UWI2 310 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 KIAA0907Q7Z7F0 614 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 HORMAD1Q86X24 394 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 IPCEF1Q8WWN9 437 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-201ENST00000250448 DCSTAMPQ9H295 470 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 CPNE5Q9HCH3 593 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 ABCB10Q9NRK6 738 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 CLDND1Q9NY35 253 aa16.39■□□□□ 0.21
FOXA1-201ENST00000250448 KIF26AQ9ULI4 1882 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 SOCS5O75159 536 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 UPK1BO75841 260 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 TRIM16O95361 564 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 POP4O95707 220 aaKnown RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 CTSLP07711 333 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 LHCGRP22888 699 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 EPHA2P29317 976 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 RECQLP46063 649 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-201ENST00000250448 KIAA1614Q5VZ46 1190 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 LRRC66Q68CR7 880 aa16.38■□□□□ 0.21
FOXA1-201ENST00000250448 CRTC1Q6UUV9 634 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms