RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PATE1Q8WXA2 126 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TESCQ96BS2 214 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RHBGQ9H310 441 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CD320Q9NPF0 282 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR6C2Q9NZP2 312 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 FEZF1A0PJY2 475 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NME4O00746 187 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LRATO95237 230 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CD38P28907 300 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PI4KAP42356 2102 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CSNK1G2P78368 415 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ZFP1Q6P2D0 407 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PRMT9Q6P2P2 845 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GALNT18Q6P9A2 607 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DLEU7Q6UYE1 221 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SYT12Q8IV01 421 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 FAM20CQ8IXL6 584 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LILRA2Q8N149 483 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DNAJB14Q8TBM8 379 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GFM2Q969S9 779 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ASB9Q96DX5 294 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TRIM8Q9BZR9 551 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SCOCQ9UIL1 159 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RIMS3Q9UJD0 308 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TECTAO75443 2155 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 A0A1W2PR77 199 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 AXIN1O15169 862 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MAP3K13O43283 966 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MYO1DO94832 1006 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NPPAP01160 153 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LYNP07948 512 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 BLKP51451 505 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PHC1P78364 1004 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PHEXP78562 749 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SAMD4BQ5PRF9 694 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR2L3Q8NG85 312 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 HSPA12BQ96MM6 686 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PITHD1Q9GZP4 211 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PCDHAC1Q9H158 963 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 BCAP29Q9UHQ4 241 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 WDR87Q6ZQQ6 2873 aa18.87■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PRSS51A0A1B0GVH4 220 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SAP18O00422 153 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 UQCRBP14927 111 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TIA1P31483 386 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■■■■□ 24.9
TNFRSF1A-201ENST00000162749 RACK1P63244 317 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TRIM25Q14258 630 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 COMMD6Q7Z4G1 85 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SFTPA2Q8IWL1 248 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 FBXL6Q8N531 539 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GTF2H4Q92759 462 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SPACA7Q96KW9 195 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 VCXQ9H320 206 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MRPS30Q9NP92 439 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CMTM6Q9NX76 183 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SIRT5Q9NXA8 310 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SUCOQ9UBS9 1254 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 APOBEC3BQ9UH17 382 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PCDHA9Q9Y5H5 950 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 WDFY4Q6ZS81 3184 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ANKDD1BA6NHY2 528 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CHRM5P08912 532 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ANXA4P09525 319 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CTSEP14091 401 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PRPS1L1P21108 318 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PAX7P23759 505 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PLIN5Q00G26 463 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GPR18Q14330 331 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MAPKAPK3Q16644 382 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GRAMD1BQ3KR37 738 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PRRT3Q5FWE3 981 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ADCK2Q7Z695 626 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TAF8Q7Z7C8 310 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DCP2Q8IU60 420 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PLD3Q8IV08 490 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ADGRF3Q8IZF5 1079 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR52E6Q96RD3 313 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LRRC61Q9BV99 259 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 COPS7BQ9H9Q2 264 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SLC6A20Q9NP91 592 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NEUROG3Q9Y4Z2 214 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 FRYLO94915 3013 aa18.86■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PCDH7O60245 1069 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 JUNDP17535 347 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 BCKDHBP21953 392 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PTX3P26022 381 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CYP4F2P78329 520 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 C1orf61Q13536 156 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RABL3Q5HYI8 236 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 IQCHQ86VS3 1027 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NAGSQ8N159 534 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TMEM125Q96AQ2 219 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MIR1-1HGQ9H1L0 117 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SRMSQ9H3Y6 488 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NT5DC2Q9H857 520 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ADGRE2Q9UHX3 823 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GNG14A0A1W2PPG7 69 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 BTN3A3O00478 584 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 AKAP10O43572 662 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LCMT2O60294 686 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms