RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 IST1P53990 364 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PPP2R2BQ00005 443 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 LSAMPQ13449 338 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 VEZF1Q14119 521 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SPIDRQ14159 915 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PLCL1Q15111 1095 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TEAD4Q15561 434 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 CST6Q15828 149 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 C9orf50Q5SZB4 431 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TMEM26Q6ZUK4 368 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 THAP5Q7Z6K1 395 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 C17orf64Q86WR6 236 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PLA2G15Q8NCC3 412 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 OR5AR1Q8NGP9 310 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PPCDCQ96CD2 204 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 MPP4Q96JB8 637 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 WDR26Q9H7D7 661 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SIRT5Q9NXA8 310 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ATP6V1HQ9UI12 483 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 UTS2RQ9UKP6 389 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 BLOC1S6Q9UL45 172 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 FZD4Q9ULV1 537 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SH2B3Q9UQQ2 575 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 MAGED1Q9Y5V3 778 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 STON1Q9Y6Q2 735 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 IGLON5A6NGN9 336 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TRIM64CA6NLI5 447 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 GPR89AB7ZAQ6 455 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 KMOO15229 486 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 NOBOXO60393 691 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 KCNK5O95279 499 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 FKBP9O95302 570 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TGFB1P01137 390 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ABCB1P08183 1280 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 GPR89BP0CG08 455 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DDX5P17844 614 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CDH2P19022 906 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 EFNA1P20827 205 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 IDSP22304 550 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CXCR2P25025 360 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 KDELR2P33947 212 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DCTP40126 519 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MEF2AQ02078 507 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ARHGAP19Q14CB8 494 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 AGBL4Q5VU57 503 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 SHQ1Q6PI26 577 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TMIGD1Q6UXZ0 262 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 FAM83HQ6ZRV2 1179 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 GPR155Q7Z3F1 870 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 C11orf96Q7Z7L8 435 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 OXR1Q8N573 874 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ARL10Q8N8L6 244 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 C11orf65Q8NCR3 313 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PJA1Q8NG27 643 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 OR5K2Q8NHB8 316 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 COQ8BQ96D53 544 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MUS81Q96NY9 551 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 IL17FQ96PD4 163 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 AIF1LQ9BQI0 150 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PCBD2Q9H0N5 130 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 OR51B5Q9H339 312 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TRIT1Q9H3H1 467 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 SMURF2Q9HAU4 748 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TM9SF3Q9HD45 589 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MYNNQ9NPC7 610 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 IL1RAPQ9NPH3 570 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MIEF1Q9NQG6 463 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ADPRHL2Q9NX46 363 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 AHSPQ9NZD4 102 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 SPATA7Q9P0W8 599 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 SPASTQ9UBP0 616 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PLAGL1Q9UM63 463 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 BTBD3Q9Y2F9 522 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TSC22D4Q9Y3Q8 395 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CEPT1Q9Y6K0 416 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DNMT3AQ9Y6K1 912 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 U3KQV3 271 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 NUMA1Q14980 2115 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TRPM6Q9BX84 2022 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 C1orf226A1L170 272 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TRIM64A6NGJ6 449 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MYO1GB0I1T2 1018 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 SAP18O00422 153 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 NOL3O60936 208 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 NTRK1P04629 796 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 C5AR1P21730 350 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 IGFBP5P24593 272 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PTX3P26022 381 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RPL10P27635 214 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DRD3P35462 400 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 WASP42768 502 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RXRGP48443 463 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 HLCSP50747 726 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CDK9P50750 372 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 GAB1Q13480 694 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms