RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 UBE2E3Q969T4 207 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 RCN3Q96D15 328 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 RAB3IPQ96QF0 476 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 MTERF1Q99551 399 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 LRRC61Q9BV99 259 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 CADM1Q9BY67 442 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 C1orf21Q9H246 121 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 CCDC86Q9H6F5 360 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 ASIC5Q9NY37 505 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 NOP53Q9NZM5 478 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 SMG1Q96Q15 3661 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 THADAQ6YHU6 1953 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 KIR2DS5A0A0G2JLQ3 304 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 A0A0G2JNG1 304 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 H0YHG0 523 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 KIR2DS3K7RE56 304 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 NR5A2O00482 541 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 AIM2O14862 343 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SLC22A3O75751 556 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 VIPP01282 170 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CFIP05156 583 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 KRT16P08779 473 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 G6PDP11413 515 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 XRCC1P18887 633 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CXCR2P25025 360 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PEBP1P30086 187 aaKnown RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CPOXP36551 454 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CCR8P51685 355 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 C21orf59P57076 290 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 UFM1P61960 85 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 RPS13P62277 151 aaKnown RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 STX5Q13190 355 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 KIR2DS5Q14953 304 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CACHD1Q5VU97 1274 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 ADNP2Q6IQ32 1131 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CYP20A1Q6UW02 462 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 FAM129CQ86XR2 697 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PARP9Q8IXQ6 854 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 FAM46DQ8NEK8 389 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 OR4E2Q8NGC2 313 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 HUS1BQ8NHY5 278 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 APIPQ96GX9 242 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 AIF1LQ9BQI0 150 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SLC25A23Q9BV35 468 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 GTPBP2Q9BX10 602 aaKnown RBP12.59□□□□□ -0.39
PHGDH-221ENST00000641573 EFCAB1Q9HAE3 211 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 BRF2Q9HAW0 419 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SLC40A1Q9NP59 571 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 TMEM45AQ9NWC5 275 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 SPHK1Q9NYA1 384 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 OR6C2Q9NZP2 312 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CPNE7Q9UBL6 633 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 LAMA5O15230 3695 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 CACNA1EQ15878 2313 aa12.59□□□□□ -0.39
PHGDH-221ENST00000641573 MAGEB17A8MXT2 336 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 C9JVG2 144 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 H7BY64 318 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 FOXE1O00358 373 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 VILLO15195 856 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 BCAT2O15382 392 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 CCNDBP1O95273 360 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 CHRM5P08912 532 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 ITGAXP20702 1163 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 NUDT2P50583 147 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 UBE2IP63279 158 aaKnown RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 PHEXP78562 749 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 ABATP80404 500 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 REEP5Q00765 189 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 ELOCQ15369 112 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 TMIGD1Q6UXZ0 262 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 SFTPA2Q8IWL1 248 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 LIX1Q8N485 282 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 KYQ8NBH2 561 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 ZNF740Q8NDX6 193 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 OR4K1Q8NGD4 311 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 LMX1AQ8TE12 382 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 ZDHHC1Q8WTX9 485 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 MCUR1Q96AQ8 359 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 SLC45A3Q96JT2 553 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms