RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 MAP3K3Q99759 626 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 POLR3CQ9BUI4 534 aaPredicted RBP5.89□□□□□ -1.47
RFC1-217ENST00000639695 SLC39A8Q9C0K1 460 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 RAB17Q9H0T7 212 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 ATG10Q9H0Y0 220 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 CSTL1Q9H114 145 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 CARD9Q9H257 536 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 KCNMB3Q9NPA1 279 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 NGBQ9NPG2 151 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 PHPT1Q9NRX4 125 aaPredicted RBP5.89□□□□□ -1.47
RFC1-217ENST00000639695 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 RALYQ9UKM9 306 aaKnown RBP5.89□□□□□ -1.47
RFC1-217ENST00000639695 KIF3AQ9Y496 699 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 FAM205AQ6ZU69 1335 aa5.89□□□□□ -1.47
RFC1-217ENST00000639695 A0A1W2PN81 502 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 ANKDD1BA6NHY2 528 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 C4orf47A7E2U8 309 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 HNRNPCL2B2RXH8 293 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 PRKRAO75569 313 aaKnown RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 CRYABP02511 175 aaKnown RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 APOHP02749 345 aaPredicted RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 KRT3P12035 628 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 CDH1P12830 882 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 HLA-DOBP13765 273 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 CHRNA7P36544 502 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 NKX2-1P43699 371 aaPredicted RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 FMO5P49326 533 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 TUBA1BP68363 451 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 TAF10Q12962 218 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 GAGE5Q13069 117 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 GAGE6Q13070 117 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 OPCMLQ14982 345 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 KARSQ15046 597 aaKnown RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 FASTKD1Q53R41 847 aaKnown RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 ARMCX4Q5H9R4 360 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 RAET1GQ6H3X3 334 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 DLEU7Q6UYE1 221 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 MACC1Q6ZN28 852 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 C1orf186Q6ZWK4 172 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 PRUNE1Q86TP1 453 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 EID3Q8N140 333 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 SLC24A4Q8NFF2 622 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 NDNQ99608 321 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 RPF1Q9H9Y2 349 aaKnown RBP5.88□□□□□ -1.47
RFC1-217ENST00000639695 A4GALTQ9NPC4 353 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 FGF21Q9NSA1 209 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 STUB1Q9UNE7 303 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 NUDCQ9Y266 331 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 PLEKHA6Q9Y2H5 1048 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 CGNL1Q0VF96 1302 aa5.88□□□□□ -1.47
RFC1-217ENST00000639695 A0A1W2PPI3 338 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 O00370 1275 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 MPHOSPH10O00566 681 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 GMNNO75496 209 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 BAG4O95429 457 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 NTN1O95631 604 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 IGHDP01880 384 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 KRT5P13647 590 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 DAOP14920 347 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 EPHA2P29317 976 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 MARCKSP29966 332 aaPredicted RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 NSFP46459 744 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 OR3A3P47888 321 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 CDH11P55287 796 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 MAZP56270 477 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 FKBP1BP68106 108 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 RPL24P83731 157 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 KIR2DS3Q14952 304 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 SF3B4Q15427 424 aaKnown RBP eCLIP5.87□□□□□ -1.471e-7■■■□□ 16
RFC1-217ENST00000639695 TAF13Q15543 124 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 SLC35D3Q5M8T2 416 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 ZNF770Q6IQ21 691 aaPredicted RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 MCM10Q7L590 875 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 RTN4RL2Q86UN3 420 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 PLD3Q8IV08 490 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 ZNF444Q8N0Y2 327 aaPredicted RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 SIDT2Q8NBJ9 832 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 ZNF540Q8NDQ6 660 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 ASB5Q8WWX0 329 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 METTL21AQ8WXB1 218 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 HSD17B8Q92506 261 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 RFT1Q96AA3 541 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 TRIM44Q96DX7 344 aaPredicted RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 ALG14Q96F25 216 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 HMCESQ96FZ2 354 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 PRMT1Q99873 361 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 NTPCRQ9BSD7 190 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 ZNF577Q9BSK1 485 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 ALKBH7Q9BT30 221 aaPredicted RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 SLC35D1Q9NTN3 355 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 PIGVQ9NUD9 493 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 CGNQ9P2M7 1197 aaKnown RBP5.87□□□□□ -1.47
RFC1-217ENST00000639695 SH3GLB1Q9Y371 365 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 UBE4BO95155 1302 aa5.87□□□□□ -1.47
RFC1-217ENST00000639695 CTAGE9A4FU28 777 aa5.86□□□□□ -1.47
RFC1-217ENST00000639695 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
RFC1-217ENST00000639695 SLC28A1O00337 649 aa5.86□□□□□ -1.47
RFC1-217ENST00000639695 PSMD3O43242 534 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms