RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PCDH11YQ9BZA8 1340 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MYLKQ15746 1914 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 IGLV7-46A0A075B6I9 117 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 IGHV4-4A0A075B6R2 117 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A087WW49 117 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GPR75-ASB3A0A0A6YYF3 556 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 IGHV4-61A0A0C4DH41 118 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 LOC101059948A0A1B0GTJ6 334 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A1W2PR77 199 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NDUFAF8A1L188 74 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ENO4A6NNW6 628 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 HEPACAM2A8MVW5 462 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CDRT15L2A8MXV6 281 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NR5A2O00482 541 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF195O14628 629 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TCERG1O14776 1098 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ADAMDEC1O15204 470 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ATP6V0E1O15342 81 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ARHGEF9O43307 516 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ENTPD3O75355 529 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MED24O75448 989 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TADA2AO75478 443 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF821O75541 412 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 DDHD2O94830 711 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NXPH2O95156 264 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 DUS4LO95620 317 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GGPS1O95749 300 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 IGHV4-59P01825 116 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RAF1P04049 648 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 HMOX1P09601 288 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2T7P0C7T2 308 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM49P0CI25 452 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM49CP0CI26 452 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ERVK-10P10266 1014 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MYL6BP14649 208 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 AKR1B1P15121 316 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GNB3P16520 340 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF26P17031 533 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM21P19474 475 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 LHCGRP22888 699 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CSTF2P33240 577 aaKnown RBP eCLIP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PCGF2P35227 344 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 KRT20P35900 424 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MTHFRP42898 656 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MAGEA11P43364 429 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 BMXP51813 675 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 HERV-K104P61576 105 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GNB1P62873 340 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PRKCZQ05513 592 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF415Q09FC8 603 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RALGDSQ12967 914 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC39A6Q13433 755 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GRAPQ13588 217 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 VEZF1Q14119 521 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NR1D2Q14995 579 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PHKG1Q16816 387 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 HLA-BQ31612 363 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ITPRIPL2Q3MIP1 535 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RAB6CQ53S08 254 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 XKR6Q5GH73 641 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TCTE1Q5JU00 501 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 WLSQ5T9L3 541 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SPATA1Q5VX52 437 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MFSD12Q6NUT3 480 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CFAP161Q6P656 301 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ENOSF1Q7L5Y1 443 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CHMP1BQ7LBR1 199 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CAMKMTQ7Z624 323 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PTAR1Q7Z6K3 402 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 IQCHQ86VS3 1027 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP57Q86XR8 500 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CROCCP3Q8IVE0 287 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 APLFQ8IW19 511 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MFN1Q8IWA4 741 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 LGI2Q8N0V4 545 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SCML4Q8N228 414 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GUF1Q8N442 669 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MINDY1Q8N5J2 469 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CPSF7Q8N684 471 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SYT2Q8N9I0 419 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIML1Q8N9V2 468 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 THAP8Q8NA92 274 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 POGLUT1Q8NBL1 392 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TSPAN14Q8NG11 270 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OR11H4Q8NGC9 324 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OR4C3Q8NH37 302 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OR6S1Q8NH40 331 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CFAP61Q8NHU2 1237 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ATP8B4Q8TF62 1192 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SSMEM1Q8WWF3 244 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 KCNE4Q8WWG9 221 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MRPS27Q92552 414 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC22A18Q96BI1 424 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NSUN4Q96CB9 384 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TMCO6Q96DC7 493 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SPDL1Q96EA4 605 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GMPPAQ96IJ6 420 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PRAC1Q96KF2 57 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 LINC00479Q96M42 142 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms