RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 SCYL1Q96KG9 808 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 PITHD1Q9GZP4 211 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 ZNF358Q9NW07 568 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 XPR1Q9UBH6 696 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 OPTCQ9UBM4 332 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 RUVBL1Q9Y265 456 aaKnown RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 TNPO3Q9Y5L0 923 aaKnown RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 SPTBP11277 2137 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 NBEAQ8NFP9 2946 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 K7EPI3 171 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 OR1F1O43749 312 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 LCMT2O60294 686 aaKnown RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 SLC35G6P0C7Q6 338 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 C1GALT1C1LP0DN25 315 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 KRT15P19012 456 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ALAS2P22557 587 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 F8A1P23610 371 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 GSTM2P28161 218 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 MEF2AQ02078 507 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 PCDH1Q08174 1060 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 IFFO1Q0D2I5 559 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 FAM53BQ14153 422 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 NCF4Q15080 339 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 NDUFA9Q16795 377 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 PFKFB4Q16877 469 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 HKDC1Q2TB90 917 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 FBXO48Q5FWF7 155 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ARHGAP40Q5TG30 622 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 C1orf189Q5VU69 101 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 LCN10Q6JVE6 187 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 VN1R4Q7Z5H5 301 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ASPGQ86U10 573 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 SNX31Q8N9S9 440 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 CAMKVQ8NCB2 501 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ESAMQ96AP7 390 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 FKBP10Q96AY3 582 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 WDR34Q96EX3 536 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 SEC16BQ96JE7 1060 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 C10orf90Q96M02 699 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ROPN1BQ9BZX4 212 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ACTL8Q9H568 366 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ROPN1Q9HAT0 212 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 IFT80Q9P2H3 777 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 CPSF2Q9P2I0 782 aaKnown RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 COPG2Q9UBF2 871 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 NDOR1Q9UHB4 597 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 IL17BQ9UHF5 180 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ZFP69BQ9UJL9 534 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 CDC14AQ9UNH5 594 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 FARSAQ9Y285 508 aaKnown RBP14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 PADI2Q9Y2J8 665 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 ASB1Q9Y576 335 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 LOC400499M0QZD8 3231 aa14.06□□□□□ -0.16
CDC42BPB-209ENST00000634889 FER1L5A0AVI2 2057 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SMIM23A6NLE4 172 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 STX16-NPEPL1H3BU86 382 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 TK2O00142 265 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 STX16O14662 325 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 P2RX6O15547 441 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PRPF4O43172 522 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SMIM24O75264 130 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 H2AFYO75367 372 aaKnown RBP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 KATNA1O75449 491 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 CREG1O75629 220 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 CAPN1P07384 714 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PYGBP11216 843 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 EPB42P16452 691 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 ITGAXP20702 1163 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SCTRP47872 440 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PIK3CGP48736 1102 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 AGTR2P50052 363 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PWP1Q13610 501 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 E2F2Q14209 437 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PCBP2Q15366 365 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 TBCCQ15814 346 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SYVN1Q86TM6 617 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 KRT78Q8N1N4 520 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 ENDOVQ8N8Q3 282 aaKnown RBP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 ZNF740Q8NDX6 193 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 TRPV3Q8NET8 790 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 TTLQ8NG68 377 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SLC13A3Q8WWT9 602 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 PTCD3Q96EY7 689 aaKnown RBP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 CRELD1Q96HD1 420 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 EFCAB11Q9BUY7 163 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 DRC3Q9H069 523 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 SPNS1Q9H2V7 528 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 NT5DC2Q9H857 520 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 GEMIN8Q9NWZ8 242 aaKnown RBP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 DCDC2Q9UHG0 476 aa14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 GPN3Q9UHW5 284 aaPredicted RBP14.05□□□□□ -0.16
CDC42BPB-209ENST00000634889 A0A1W2PPM1 405 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 GOLGA8RI6L899 631 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 NDUFS4O43181 175 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 GLRA3O75311 464 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 MED26O95402 600 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 ALBP02768 609 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 EPORP19235 508 aa14.04□□□□□ -0.16
CDC42BPB-209ENST00000634889 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms