RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CYP2A6P11509 494 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PNLIPP16233 465 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 F8A1P23610 371 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NFKBIAP25963 317 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 MGAT1P26572 445 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 RPL10P27635 214 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 COL8A1P27658 744 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PSMB4P28070 264 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NOS3P29474 1203 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 HCAR3P49019 387 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SRSF2Q01130 221 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TUBB3Q13509 450 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 MROH9Q5TGP6 573 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 AFMIDQ63HM1 303 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 KCTD11Q693B1 232 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TMEM71Q6P5X7 295 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CEACAM20Q6UY09 585 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 RINLQ6ZS11 566 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ASB18Q6ZVZ8 466 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ARHGAP12Q8IWW6 846 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 LPCAT1Q8NF37 534 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 OR6Y1Q8NGX8 325 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GIMAP7Q8NHV1 300 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 N4BP2L2Q92802 583 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SLC45A3Q96JT2 553 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SEMA3CQ99985 751 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SIKE1Q9BRV8 207 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PDFQ9HBH1 243 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 AP5S1Q9NUS5 200 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SYBUQ9NX95 663 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TBC1D29Q9UFV1 150 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ADGRE2Q9UHX3 823 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 LRRC42Q9Y546 428 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PSAT1Q9Y617 370 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 X6R8D5 127 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ANKRD36A6QL64 1941 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 A6NCN8 305 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PLIN3O60664 434 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GLRA3O75311 464 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 MTX2O75431 263 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PROCP04070 461 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ALOX15P16050 662 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ENPP1P22413 925 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GNLYP22749 145 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PTPN3P26045 913 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ADMP35318 185 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 RENBPP51606 427 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 RAP1GDS1P52306 607 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 AGFG1P52594 562 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CRADDP78560 199 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 RAPSNQ13702 412 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PCLAFQ15004 111 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ZRSR2Q15696 482 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GPR19Q15760 415 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 INSCQ1MX18 579 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 MARC1Q5VT66 337 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 IRGCQ6NXR0 463 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NUDCD3Q8IVD9 361 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 COQ10AQ96MF6 247 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CATSPER2Q96P56 530 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PSKH2Q96QS6 385 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CCDC106Q9BWC9 280 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TWSG1Q9GZX9 223 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 WWP1Q9H0M0 922 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ADNPQ9H2P0 1102 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CXorf56Q9H5V9 222 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PRDM8Q9NQV8 689 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 THAP1Q9NVV9 213 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TAS2R1Q9NYW7 299 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PCYT1BQ9Y5K3 369 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 OAS3Q9Y6K5 1087 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TSPAN11A1L157 253 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 A6NL46 340 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KIF1CO43896 1103 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ENTPD5O75356 428 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CLDN7O95471 211 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 AP2A1O95782 977 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF28P17035 718 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 MANFP55145 182 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 RPS18P62269 152 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 IRF9Q00978 393 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 IL10RBQ08334 325 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PPIDQ08752 370 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 LSAMPQ13449 338 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TBCCQ15814 346 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 EIF2S3LQ2VIR3 472 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SPANXN3Q5MJ09 141 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CATSPEREQ5SY80 951 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FAM92BQ6ZTR7 304 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CXorf67Q86X51 503 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 LZTR1Q8N653 840 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PIWIL2Q8TC59 973 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 HDAC11Q96DB2 347 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ECHDC3Q96DC8 303 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 RSRC1Q96IZ7 334 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 OR6C1Q96RD1 312 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 NUDCD1Q96RS6 583 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms