RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 EHD1Q9H4M9 534 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FAM60AQ9NP50 221 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FAM53CQ9NYF3 392 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 SEMA5BQ9P283 1151 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TRPS1Q9UHF7 1281 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF225Q9UK10 706 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CLCA2Q9UQC9 943 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FIS1Q9Y3D6 152 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KLK4Q9Y5K2 254 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KCNE1BA0A087WTH5 132 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TRBC2A0A5B9 178 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 EFCAB7A8K855 629 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TMX2-CTNND1H3BSU7 103 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 KLF11O14901 512 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 HGSO14964 777 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 POLR3GO15318 223 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 HCRTR1O43613 425 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 LCMT2O60294 686 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SNUPNO95149 360 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 STATHP02808 62 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ENO1P06733 434 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 CAPN1P07384 714 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 FOLR1P15328 257 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 HMOX2P30519 316 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 CCKBRP32239 447 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 CSTF2P33240 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 MDH1P40925 334 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 BCL6P41182 706 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 FOXA1P55317 472 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 RPS15AP62244 130 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 CYP4F2P78329 520 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 GALNT1Q10472 559 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 DDX39BQ13838 428 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 E2F2Q14209 437 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZRSR2Q15696 482 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 GPR19Q15760 415 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ISXQ2M1V0 245 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 GGTA1PQ4G0N0 100 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZC3H12BQ5HYM0 836 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TCHHL1Q5QJ38 904 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SH2D4BQ5SQS7 431 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 CLEC6AQ6EIG7 209 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 FRMPD2BQ6IN97 320 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ADNP2Q6IQ32 1131 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 MED27Q6P2C8 311 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 FBXO42Q6P3S6 717 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TMIGD1Q6UXZ0 262 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 RNF44Q7L0R7 432 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 DNAJC22Q8N4W6 341 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF781Q8N8C0 355 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 MFSD9Q8NBP5 474 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 METTL6Q8TCB7 284 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 N4BP2L2Q92802 583 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 UBE2E3Q969T4 207 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 RERGQ96A58 199 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 REPS1Q96D71 796 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 MTFMTQ96DP5 389 aaKnown RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SORT1Q99523 831 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZFYVE21Q9BQ24 234 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SLC29A3Q9BZD2 475 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 PITHD1Q9GZP4 211 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 SYNPO2LQ9H987 977 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 FANCEQ9HB96 536 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TNFRSF12AQ9NP84 129 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 THAP1Q9NVV9 213 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 DLL3Q9NYJ7 618 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 AKAP7Q9P0M2 348 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZDHHC2Q9UIJ5 367 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 PILRAQ9UKJ1 303 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF490Q9ULM2 529 aaPredicted RBP8.15□□□□□ -1.1
SGMS1-211ENST00000626236 PLCL2Q9UPR0 1127 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 BTRCQ9Y297 605 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 TIMM22Q9Y584 194 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 PCDHGA11Q9Y5H2 935 aa8.15□□□□□ -1.1
SGMS1-211ENST00000626236 LOC105369274A0A096LPK9 316 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 LOC102723532A0A0G2JNH3 316 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 FAM149AA5PLN7 773 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TMEM233B4DJY2 109 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TCP11X1B4DZS4 312 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TMEM150CB9EJG8 249 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 H0YGG7 62 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 H0YIV9 168 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 AZIN1O14977 448 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 NDUFS4O43181 175 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 EIF2S1P05198 315 aaKnown RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SERPIND1P05546 499 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 CTSBP07858 339 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 KITP10721 976 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 UROSP10746 265 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SERPINB3P29508 390 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 AHRP35869 848 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SCTRP47872 440 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 NEK2P51955 445 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 VSX2P58304 361 aaPredicted RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 ARF3P61204 181 aaPredicted RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 OCRLQ01968 901 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 FOXM1Q08050 763 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms