RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ZSWIM9Q86XI8 627 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 MIER2Q8N344 545 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 IL17RCQ8NAC3 791 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 TMEM80Q96HE8 168 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 ZSCAN5AQ9BUG6 496 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-219ENST00000615335 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
FOXN3-219ENST00000615335 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF99A8MXY4 864 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 AZIN1O14977 448 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 NDUFA2O43678 99 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 SIX3O95343 332 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 KLF8O95600 359 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 GOT2P00505 430 aaKnown RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ELK4P28324 431 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 TALDO1P37837 337 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 SEPHS1P49903 392 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF45Q02386 682 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ENPP2Q13822 863 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 DGLUCYQ7Z3D6 616 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 HDDC2Q7Z4H3 204 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 R3HCC1LQ7Z5L2 792 aaKnown RBP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 SH3KBP1Q96B97 665 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 FAM129BQ96TA1 746 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 MMP27Q9H306 513 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 ANAPC2Q9UJX6 822 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
FOXN3-219ENST00000615335 AURKCQ9UQB9 309 aa12.65□□□□□ -0.38
FOXN3-219ENST00000615335 A8MX80 341 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 UBXN8O00124 270 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 NME4O00746 187 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ANGPT2O15123 496 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CD3EAPO15446 510 aaKnown RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 PRKD3O94806 890 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TRBC1P01850 177 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 GPIP06744 558 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CYP2A7P20853 494 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CCINQ13939 588 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 GRB7Q14451 532 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ACOX1Q15067 660 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 PFKFB4Q16877 469 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 FBXO43Q4G163 708 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 LRRC73Q5JTD7 316 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CATSPEREQ5SY80 951 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 BRAT1Q6PJG6 821 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ADGRG5Q8IZF4 528 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 NDNFQ8TB73 568 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 RNF170Q96K19 258 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ADNPQ9H2P0 1102 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 UCKL1Q9NWZ5 548 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ABCD2Q9UBJ2 740 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ARL5AQ9Y689 179 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 A0A0U1RQS6 177 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 A0A0X1KG70 313 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 LRRC14BA6NHZ5 514 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 H0YC42 278 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 PPP6CO00743 305 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CTDSP2O14595 271 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ST13P50502 369 aaKnown RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TPD52P55327 224 aaPredicted RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 MRPS21P82921 87 aaKnown RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TIAL1Q01085 375 aaKnown RBP eCLIP12.64□□□□□ -0.398e-7■■■□□ 17
FOXN3-219ENST00000615335 ACVR1Q04771 509 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 STARD3Q14849 445 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 OR4D1Q15615 310 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 ADPRMQ3LIE5 342 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CLVS2Q5SYC1 327 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 KANK2Q63ZY3 851 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 GDPD3Q7L5L3 318 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 CACUL1Q86Y37 369 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 METTL4Q8N3J2 472 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 MINDY1Q8N5J2 469 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 DTX3Q8N9I9 347 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TMIEQ8NEW7 156 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 MDGA1Q8NFP4 955 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 GPR150Q8NGU9 434 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■■ 39.6
FOXN3-219ENST00000615335 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 SLIRPQ9GZT3 109 aaKnown RBP12.64□□□□□ -0.39
FOXN3-219ENST00000615335 POPDC3Q9HBV1 291 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
FOXN3-219ENST00000615335 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms