RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PPP3CBP16298 524 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 HLA-FP30511 346 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DDOSTP39656 456 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 OPRL1P41146 370 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 HIST2H3PS2Q5TEC6 136 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DCUN1D3Q8IWE4 304 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 BIRC7Q96CA5 298 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PRDM12Q9H4Q4 367 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 KIF25Q9UIL4 384 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DERAQ9Y315 318 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 P2RX6O15547 441 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF208O43345 1280 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DFFBO76075 338 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ATG12O94817 140 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 IFNA5P01569 189 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CALCRP30988 508 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PITPNBP48739 271 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 RASGRP3Q8IV61 690 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CELF1Q92879 486 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ELP4Q96EB1 424 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CDADC1Q9BWV3 514 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CACNG6Q9BXT2 260 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SLC16A8O95907 504 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 LEPRP48357 1165 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF33AQ06730 810 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PMS2P3Q13401 168 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SEMA5AQ13591 1074 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SETMARQ53H47 684 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 NRROSQ86YC3 692 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF649Q9BS31 505 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 THG1LQ9NWX6 298 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ATG4BQ9Y4P1 393 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PTPN6P29350 595 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DUOXA1Q1HG43 343 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 IRAK1BP1Q5VVH5 260 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 OR6Q1Q8NGQ2 317 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 OR2L8Q8NGY9 312 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PIGMQ9H3S5 423 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 WASH4PA8MWX3 477 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 E5RJQ4 531 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ADAMTS3O15072 1205 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 RENP00797 406 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ERVK-25P63136 954 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CRADDP78560 199 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CAP1Q01518 475 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 GPR19Q15760 415 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DALRD3Q5D0E6 543 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 CRB2Q5IJ48 1285 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 MASTLQ96GX5 879 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 GPATCH2LQ9NWQ4 482 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 N6AMT1Q9Y5N5 214 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SEC14L2O76054 403 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 KLRC2P26717 231 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DOK6Q6PKX4 331 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 YAF2Q8IY57 180 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 LIX1Q8N485 282 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 NAV1Q8NEY1 1877 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF578Q96N58 590 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ALPK1Q96QP1 1244 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 POPDC3Q9HBV1 291 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 IKZF2Q9UKS7 526 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 RBM7Q9Y580 266 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 CEPT1Q9Y6K0 416 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DUXAA6NLW8 204 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 AQP9O43315 295 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZNF821O75541 412 aaPredicted RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 FNTBP49356 437 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 DCLRE1AQ6PJP8 1040 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 GSG1LQ6UXU4 331 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 RNF130Q86XS8 419 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 IL25Q9H293 177 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 DPEP2Q9H4A9 486 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CHRAC1Q9NRG0 131 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MS4A12Q9NXJ0 267 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CHD5Q8TDI0 1954 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 NPEPPSL1A6NEC2 478 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 LATS1O95835 1130 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZACNQ401N2 412 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 SLC22A25Q6T423 547 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 FAM183BPQ6ZVS7 135 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZNF584Q8IVC4 421 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CLIP4Q8N3C7 705 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 FTMTQ8N4E7 242 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PLD5Q8N7P1 536 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 OR8J1Q8NGP2 316 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 HSH2DQ96JZ2 352 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms