RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 EDNRAP25101 427 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 HLCSP50747 726 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 TGFBIQ15582 683 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 RABL3Q5HYI8 236 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 REEP3Q6NUK4 255 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 POMZP3Q6PJE2 187 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 IQCF2Q8IXL9 164 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 THAP6Q8TBB0 222 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 TRUB1Q8WWH5 349 aaKnown RBP20.47■□□□□ 0.87
SH3D19-211ENST00000604030 ITFG2Q969R8 447 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 ITPKCQ96DU7 683 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 MAGIXQ9H6Y5 334 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 TRPV4Q9HBA0 871 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 ABCC6O95255 1503 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 PPEF2O14830 753 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 SPATA31D3P0C874 917 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 SLC13A2Q13183 592 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 PON3Q15166 354 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 ZNF783Q6ZMS7 281 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 SPATA31D4Q6ZUB0 917 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 OR9I1Q8NGQ6 314 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 NFKBIDQ8NI38 313 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 CPNE2Q96FN4 548 aaPredicted RBP20.47■□□□□ 0.87
SH3D19-211ENST00000604030 ADAP2Q9NPF8 381 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 IL36AQ9UHA7 158 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 CDC14AQ9UNH5 594 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 SLC22A14Q9Y267 594 aa20.47■□□□□ 0.87
SH3D19-211ENST00000604030 C5orf51A6NDU8 294 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 GADD45AP24522 165 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 BMP8BP34820 402 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 RPS24P62847 133 aaKnown RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 VLDLRP98155 873 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 PUM1Q14671 1186 aaKnown RBP eCLIP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 BMP8AQ7Z5Y6 402 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 IQCHQ86VS3 1027 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 TREML1Q86YW5 311 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 SLAIN1Q8ND83 568 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 ZNF431Q8TF32 576 aaPredicted RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 NXPE2Q96DL1 559 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 CD180Q99467 661 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 TMEM45AQ9NWC5 275 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 AOC2O75106 756 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 SCGNO76038 276 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 HOXD13P35453 343 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 SHQ1Q6PI26 577 aaKnown RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 CEACAM20Q6UY09 585 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 ZNF227Q86WZ6 799 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 GID4Q8IVV7 300 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 DCAF4L2Q8NA75 395 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 RIPOR3Q96MK2 946 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 HIST1H2AAQ96QV6 131 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 PHOX2BQ99453 314 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 PKP4Q99569 1192 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 ELAC1Q9H777 363 aaKnown RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 BRD7Q9NPI1 651 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 MT-ND5P03915 603 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 C6orf141Q5SZD1 244 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 ARL9Q6T311 187 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 LRRTM4Q86VH4 590 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 OVCA2Q8WZ82 227 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 ZC3H10Q96K80 434 aaKnown RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 AIFM2Q9BRQ8 373 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 GTPBP2Q9BX10 602 aaKnown RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 CHMP1AQ9HD42 196 aaPredicted RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 MAGED1Q9Y5V3 778 aaPredicted RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 PRMT2P55345 433 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 FADDQ13158 208 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 LRRC32Q14392 662 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 TRAM2Q15035 370 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 FAM43BQ6ZT52 329 aaPredicted RBP20.46■□□□□ 0.87
SH3D19-211ENST00000604030 GALNTL5Q7Z4T8 443 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 LMO3Q8TAP4 145 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 GNPDA2Q8TDQ7 276 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 POF1BQ8WVV4 589 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 FUZQ9BT04 418 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 SLC45A1Q9Y2W3 748 aa20.46■□□□□ 0.87
SH3D19-211ENST00000604030 L7N2F9 121 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 TGFB1P01137 390 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 MINDY4Q4G0A6 757 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 OGFRL1Q5TC84 451 aaPredicted RBP20.45■□□□□ 0.86
SH3D19-211ENST00000604030 STEAP4Q687X5 459 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 NANOGP8Q6NSW7 305 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 ASB18Q6ZVZ8 466 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 PSD4Q8NDX1 1056 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 NANOGQ9H9S0 305 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 PTGR1Q14914 329 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 C6orf136Q5SQH8 315 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 PIM3Q86V86 326 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 ZNF384Q8TF68 577 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 HERVK_113Q902F9 699 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 WDR26Q9H7D7 661 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 UNCXA6NJT0 531 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 NRLP54845 237 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 TECRLQ5HYJ1 363 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 XKR5Q6UX68 686 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 VITQ6UXI7 678 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 TXNDC5Q8NBS9 432 aaKnown RBP20.45■□□□□ 0.86
SH3D19-211ENST00000604030 IRF2BPLQ9H1B7 796 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 SERINC1Q9NRX5 453 aa20.45■□□□□ 0.86
SH3D19-211ENST00000604030 IFT172Q9UG01 1749 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms