RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SYNPO2LQ9H987 977 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 TARM1B6A8C7 271 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 KDM1AO60341 852 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 NEURL1O76050 574 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 AP2A2O94973 939 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 GSTM1P09488 218 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 ZNF24P17028 368 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 DNASE1P24855 282 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 ADSLP30566 484 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 PTGS2P35354 604 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC26A3P40879 764 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 NR0B1P51843 470 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 DGKQP52824 942 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 DLX5P56178 289 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 AP2B1P63010 937 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 SNRPNP63162 240 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 GSTM4Q03013 218 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 PMPCAQ10713 525 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 ZNF468Q5VIY5 522 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC25A25Q6KCM7 469 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 FBXO42Q6P3S6 717 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 ZC3H7AQ8IWR0 971 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 EID3Q8N140 333 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 TMEM178AQ8NBL3 297 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 OR13J1Q8NGT2 312 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 OR2L8Q8NGY9 312 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 RND1Q92730 232 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 SEC16BQ96JE7 1060 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 PDLIM2Q96JY6 352 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 EIF2B3Q9NR50 452 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-208ENST00000595726 FAM237BA0A1B0GVD1 139 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 OR51F1A6NGY5 319 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 H0YGG7 62 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 ZSCAN12O43309 604 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 KLK8O60259 260 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 GAS8O95995 478 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 FTH1P02794 183 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 C8orf89P0DMQ9 161 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 ERVK-10P10266 1014 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 RFC3P40938 356 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 ARF3P61204 181 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 BASP1P80723 227 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 KCTD19Q17RG1 926 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 HKDC1Q2TB90 917 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 PLAG1Q6DJT9 500 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 C4orf22Q6V702 233 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 GSTA5Q7RTV2 222 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 NUDT8Q8WV74 236 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 MS4A14Q96JA4 679 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 PBKQ96KB5 322 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 C18orf12Q96KH6 178 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 ZNF778Q96MU6 729 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 ALPK1Q96QP1 1244 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 CYTH2Q99418 400 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 MKKSQ9NPJ1 570 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 C14orf105Q9NVL8 296 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 GNPTGQ9UJJ9 305 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 RIMKLBQ9ULI2 386 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 CDC14AQ9UNH5 594 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 L3MBTL1Q9Y468 752 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 FAM169AQ9Y6X4 670 aa12.96□□□□□ -0.33
SHKBP1-208ENST00000595726 A0A0A6YYC8 382 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 GABRR3A8MPY1 467 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 I3L1I5 382 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 FOXS1O43638 330 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 OR1I1O60431 355 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 INHBBP09529 407 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 ADRA1DP25100 572 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CCR7P32248 378 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 FOXN2P32314 431 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 ACVR1Q04771 509 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 HSPA14Q0VDF9 509 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 MEP1AQ16819 746 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CCSMST1Q4G0I0 132 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 TSTD2Q5T7W7 516 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 TMEM211Q6ICI0 200 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 LRRC8BQ6P9F7 803 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CXXC5Q7LFL8 322 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CPEB2Q7Z5Q1 589 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 FAM98AQ8NCA5 519 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 RMND5BQ96G75 393 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 VN1R1Q9GZP7 353 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 CLEC4MQ9H2X3 399 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 SLC2A6Q9UGQ3 507 aa12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 TTC7AQ9ULT0 858 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-208ENST00000595726 RUVBL1Q9Y265 456 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms