RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GARNL3Q5VVW2 1013 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 PRMT9Q6P2P2 845 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SHISA6Q6ZSJ9 500 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 FRA10AC1Q70Z53 315 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 PRSS41Q7RTY9 318 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 MFSD9Q8NBP5 474 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC44A1Q8WWI5 657 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC5A11Q8WWX8 675 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 KIAA1191Q96A73 305 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 MOCOSQ96EN8 888 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 EGFL8Q99944 293 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 RHOXF2Q9BQY4 288 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 MESP1Q9BRJ9 268 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ING2Q9H160 280 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC25A18Q9H1K4 315 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF304Q9HCX3 659 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SNX15Q9NRS6 342 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 TLK1Q9UKI8 766 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC22A14Q9Y267 594 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ASB1Q9Y576 335 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 RELNP78509 3460 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 IGLV3-12A0A075B6K2 115 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 A0A0A6YYC8 382 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 TRBC2A0A5B9 178 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 I3L1I5 382 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 MASP2O00187 686 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 PRAMEF4O60810 478 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 CEACAM4O75871 244 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 FAM153BP0C7A2 387 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 PIM1P11309 404 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 SFTPCP11686 197 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 TFEBP19484 476 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 FBLP22087 321 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 CRABP2P29373 138 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 GGT5P36269 586 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC26A3P40879 764 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 HNMTP50135 292 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 CCR8P51685 355 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 EFNA3P52797 238 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 REEP5Q00765 189 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 C19orf57Q0VDD7 668 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 DSG2Q14126 1118 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 UAP1Q16222 522 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 SYT16Q17RD7 645 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 FAM153CQ494X1 144 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 PRAMEF9Q5VWM5 478 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 PDSS2Q86YH6 399 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 GPSM1Q86YR5 675 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 RAB43Q86YS6 212 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ANKRD53Q8N9V6 530 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 KCT2Q8NC54 265 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 PDPRQ8NCN5 879 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 C9orf43Q8TAL5 461 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 UHMK1Q8TAS1 419 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 STT3BQ8TCJ2 826 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 KCTD4Q8WVF5 259 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 COL26A1Q96A83 441 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ESAMQ96AP7 390 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 MVB12AQ96EY5 273 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ATOH8Q96SQ7 321 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 TXLNGYQ9BZA5 131 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 DRC3Q9H069 523 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 SOX17Q9H6I2 414 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ALG9Q9H6U8 611 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 TP53TG5Q9Y2B4 290 aa10.44□□□□□ -0.74
SHKBP1-206ENST00000595523 SHANK1Q9Y566 2161 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 B8ZZF3 427 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 TXNDC9O14530 226 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 SOCS6O14544 535 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 OR1F1O43749 312 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 WDR47O94967 919 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 C2P06681 752 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 CD63P08962 238 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 LTA4HP09960 611 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 ZGLP1P0C6A0 271 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MYBL2P10244 700 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MTHFD2P13995 350 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 IL1RNP18510 177 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 EPORP19235 508 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 VARSP26640 1264 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 GCAP28676 217 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MAGEA12P43365 314 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 SCTRP47872 440 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MAT1AQ00266 395 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 KLC1Q07866 573 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 FAM53BQ14153 422 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 VWA2Q5GFL6 755 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 CDKL4Q5MAI5 379 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 NXPE4Q6UWF7 544 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 SLCO4C1Q6ZQN7 724 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 RAPH1Q70E73 1250 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 TMPRSS11BQ86T26 416 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 TBC1D1Q86TI0 1168 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 ASPGQ86U10 573 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms