RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CRB3Q9BUF7 120 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 VIPAS39Q9H9C1 493 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF304Q9HCX3 659 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 EIF2B3Q9NR50 452 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 SUCOQ9UBS9 1254 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF282Q9UDV7 671 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 PLAGL1Q9UM63 463 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 HS3ST3B1Q9Y662 390 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 PRSS21Q9Y6M0 314 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CENPEQ02224 2701 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 TNRC6AQ8NDV7 1962 aaKnown RBP9.01□□□□□ -0.97
BRCA1-226ENST00000591534 CELSR2Q9HCU4 2923 aa9.01□□□□□ -0.97
BRCA1-226ENST00000591534 PIKFYVEQ9Y2I7 2098 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 NSG1A0A0A6YYJ2 146 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 TRAV17A0A0B4J275 112 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MAGEB16A2A368 324 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 HYKKA2RU49 373 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 PRMT5O14744 637 aaPredicted RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 TTI1O43156 1089 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 CNOT3O75175 753 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 VPS26AO75436 327 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 GOT2P00505 430 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 CRYABP02511 175 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 ZSCAN5DPP0CG00 497 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 TPBGLP0DKB5 382 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MLNP12872 115 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 ICAM2P13598 275 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 ATF4P18848 351 aaPredicted RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 CCR7P32248 378 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 PHBP35232 272 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 GRIA1P42261 906 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 CSE1LP55060 971 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 EIF3BP55884 814 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 ARL4CP56559 192 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 GPS1Q13098 491 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MUM1Q2TAK8 710 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 TSTD2Q5T7W7 516 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 C1QL3Q5VWW1 255 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 NAPRTQ6XQN6 538 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 LINC00696Q6ZRV3 163 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 TRMT10CQ7L0Y3 403 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 NDUFAF7Q7L592 441 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 OTOAQ7RTW8 1153 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 LRRC6Q86X45 466 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 WFDC8Q8IUA0 241 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 LMNTD1Q8N9Z9 388 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MCUQ8NE86 351 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 PPHLN1Q8NEY8 458 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 OR11G2Q8NGC1 345 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 OR52K1Q8NGK4 314 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 OR1N1Q8NGS0 311 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 IFT81Q8WYA0 676 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 INPP5DQ92835 1189 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 CAVIN3Q969G5 261 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MAGEB10Q96LZ2 347 aaPredicted RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 STMN4Q9H169 189 aaPredicted RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 ZBTB20Q9HC78 741 aaPredicted RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 SLC22A11Q9NSA0 550 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 COPG2Q9UBF2 871 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 GNPTGQ9UJJ9 305 aa9□□□□□ -0.97
BRCA1-226ENST00000591534 MRPS2Q9Y399 296 aaKnown RBP9□□□□□ -0.97
BRCA1-226ENST00000591534 OR51F1A6NGY5 319 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 VSTM2BA6NLU5 285 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 PRSS44E7EML9 344 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 TXNDC9O14530 226 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 DNALI1O14645 258 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 OR1I1O60431 355 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 GPC4O75487 556 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 NDUFS3O75489 264 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 JRKO75564 520 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SUN1O94901 812 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SLCO2B1O94956 709 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SEC31AO94979 1220 aaKnown RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CTSBP07858 339 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 STSP08842 583 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 GSTA2P09210 222 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ZGLP1P0C6A0 271 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 TPSB2P20231 275 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 AOAHP28039 575 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ATP5DP30049 168 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CMPK1P30085 196 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 PEBP1P30086 187 aaKnown RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 GRIA3P42263 894 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 OR1D4P47884 311 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CASP6P55212 293 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 VSX2P58304 361 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 RPS26P62854 115 aaKnown RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 RBPJQ06330 500 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 TPSAB1Q15661 275 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CCDC38Q502W7 563 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 HSP90B2PQ58FF3 399 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 WASHC2DQ5SRD0 308 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SP5Q6BEB4 398 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CNSTQ6PJW8 725 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SHISA6Q6ZSJ9 500 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SDCCAG8Q86SQ7 713 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SRRM1Q8IYB3 904 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms