RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CTRCQ99895 268 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 NTMT1Q9BV86 223 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 SLC7A5P2Q9GIP4 190 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 C12orf65Q9H3J6 166 aaKnown RBP18.73■□□□□ 0.59
CIRBP-220ENST00000588917 NOL11Q9H8H0 719 aaKnown RBP18.73■□□□□ 0.59
CIRBP-220ENST00000588917 ACTR8Q9H981 624 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 SLC17A7Q9P2U7 560 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 DKK4Q9UBT3 224 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 ASB1Q9Y576 335 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 PCDHB3Q9Y5E6 796 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 PCM1Q15154 2024 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 APC2O95996 2303 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 ACACAQ13085 2346 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 LRRC14BA6NHZ5 514 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 CDRT15L2A8MXV6 281 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 CLDN9O95484 217 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 OTCP00480 354 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 CCNG1P51959 295 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 EMP3P54852 163 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 CLCQ05315 142 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 GRM7Q14831 915 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 RBBP5Q15291 538 aaKnown RBP18.72■□□□□ 0.59
CIRBP-220ENST00000588917 WASHC2DQ5SRD0 308 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 TMEM126BQ8IUX1 230 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 TTC29Q8NA56 475 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-220ENST00000588917 MFSD9Q8NBP5 474 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 CAMKVQ8NCB2 501 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 OR1L3Q8NH93 324 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 ZNF285Q96NJ3 590 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 DRC3Q9H069 523 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 APMAPQ9HDC9 416 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 GEMIN8Q9NWZ8 242 aaKnown RBP18.72■□□□□ 0.59
CIRBP-220ENST00000588917 NKIRAS1Q9NYS0 192 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 ADGRE2Q9UHX3 823 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 RAXQ9Y2V3 346 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 PCDHGA4Q9Y5G9 962 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 B3GALT1Q9Y5Z6 326 aa18.72■□□□□ 0.59
CIRBP-220ENST00000588917 FASNP49327 2511 aaKnown RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 FEZF1A0PJY2 475 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 C9orf172C9J069 976 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 H0YGG7 62 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 DYNC1I1O14576 645 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 BIRC5O15392 142 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 BRINP1O60477 761 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SCRG1O75711 98 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SASH3O75995 380 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 EIF2S1P05198 315 aaKnown RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 EPORP19235 508 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SLC5A2P31639 672 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 HPDP32754 393 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 ETV4P43268 484 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SCTRP47872 440 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 NAGLUP54802 743 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 VSX2P58304 361 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 ARF3P61204 181 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 REEP5Q00765 189 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 PWP1Q13610 501 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 DEFB110Q30KQ9 67 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 UNC50Q53HI1 259 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 FRMPD2BQ6IN97 320 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 MILR1Q7Z6M3 343 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 C10orf107Q8IVU9 208 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 CCNYL1Q8N7R7 359 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SLC13A3Q8WWT9 602 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 ARL8AQ96BM9 186 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 REPS1Q96D71 796 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 CNDP1Q96KN2 507 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 TMEM237Q96Q45 408 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 NDC1Q9BTX1 674 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SPRTNQ9H040 489 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-220ENST00000588917 ASCL3Q9NQ33 180 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 ZFP69BQ9UJL9 534 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 SRPK3Q9UPE1 567 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 PCDHGA11Q9Y5H2 935 aa18.71■□□□□ 0.59
CIRBP-220ENST00000588917 FITM1A5D6W6 292 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ANKDD1BA6NHY2 528 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ZSCAN9O15535 394 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 LCMT2O60294 686 aaKnown RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 BPGMP07738 259 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 SLC35G6P0C7Q6 338 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 SERPINB1P30740 379 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ARL1P40616 181 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 MEF2AQ02078 507 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 GPS2Q13227 327 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 SLBPQ14493 270 aaKnown RBP eCLIP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 PCLAFQ15004 111 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 RBBP7Q16576 425 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 COL28A1Q2UY09 1125 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 C10orf62Q5T681 223 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 HHATQ5VTY9 493 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 GARNL3Q5VVW2 1013 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 GRHL2Q6ISB3 625 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 PWWP2BQ6NUJ5 590 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 MED27Q6P2C8 311 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 PLD3Q8IV08 490 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 NUDCD3Q8IVD9 361 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 CSNK1A1LQ8N752 337 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 L3MBTL4Q8NA19 623 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 TM4SF19Q96DZ7 209 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms